EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_PORG3 (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.835e-43
Identity = 102/245 (41.63%), Postives = 141/245 (57.55%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            D  I DLIEKE +RQ +GIELIASENF S  V++A+GS +TNKY+EG PG RYYGG E +D+ E +   R  Q +     +W  NVQP+SG+ AN A   A LE  D  MGL+L  GGHL+H      G  ++++ IL   + Y ++  TG +DY+ +E+ A++ + KLII GGSA  REW+Y + +  A+K G       A   GL +   +  P     ++ +        T  K   GPRGG
Sbjct:    4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLY---GAEW-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSH------GSLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHIVTS--------TTHKTLRGPRGG 230          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.835e-43
Identity = 113/253 (44.66%), Postives = 144/253 (56.92%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L   DP I DLIE+E +RQ +G+ELIASEN+TS AV+EA GS LTNKY+EG+PG RYYGG EF+D IE L   RA Q F         NVQP+SG+ AN A +TA+L+P D I+G+ L  GGHLTHG   +   K            Y V+  TG IDY+ L  KA   R KLI  G SA PR  ++A+ +  A++ G      + +  +A +AG      L+ TG + P P         T  K   GPRGG
Sbjct:    5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIDRACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHGSPVNFSGKWYNVHF------YGVDPQTGQIDYDDLAAKARAIRPKLITSGASAYPRLIDFARMRQIADEVG-----ALLMADIAHIAG------LVATG-EHPSPVGHAHIITTTTHKTLRGPRGG 235          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_AMOA5 (Serine hydroxymethyltransferase OS=Amoebophilus asiaticus (strain 5a2) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.835e-43
Identity = 110/245 (44.90%), Postives = 136/245 (55.51%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGI----GLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            D +I  LIEKE +RQ  G+ELIASENF S  ++EA GS LTNKY+EG+PG RYYGG E +DEIE L   RA   FH     W  NVQP+SGS AN A   AVLEP D+I+G +L  GGHLTH      G  ++ +  L ES  Y V   TG ID+ ++   A     KLIICG SA  R+W+Y + +  A++ G      I    GL S   +  P      + T        T  K   GPRGG
Sbjct:    4 DTQIFTLIEKEYQRQNEGLELIASENFVSQQIMEAAGSILTNKYAEGLPGRRYYGGCEIVDEIETLAIERAKSLFH---ASW-ANVQPHSGSQANAAVMFAVLEPGDKILGFNLAHGGHLTH------GSPVNFSGQLYESHFYGVQPETGLIDWEEVGTIAEQVNPKLIICGASAYSRDWDYKRLRAIADQVGALLLADISHPAGLISRGLLNDPVPYCHFITT--------TTHKTLRGPRGG 230          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_THEM4 (Serine hydroxymethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43
Identity = 108/254 (42.52%), Postives = 146/254 (57.48%), Query Frame = 2
Query:   83 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            W N  ++ VDPEI+++I KE  RQ  G+ELIASENF S AVIEA+GS LTNKY+EG PG RYYGG E++D  E L R RA + F++       NVQP+SGS AN  AY AV EP D IMG+ L  GGHLTH      G  ++ +  +   + Y V+S T  I+Y+++ E AL  + K+II GGSA  +  ++ +F+  A++ G       A   GL +      P     ++ +        T  K   GPRGG
Sbjct:    2 WEN--VKKVDPEIYEVILKEWDRQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTH------GAPVNFSGRIYNVVSYGVDSETEVINYDEVRELALKHKPKIIIAGGSAYSKIIDFKRFREIADEVGAYLIVDMAHFAGLVAAGIYPNPAEYAHIVTS--------TTHKTLRGPRGG 235          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_METHJ (Serine hydroxymethyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=glyA PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43
Identity = 110/255 (43.14%), Postives = 141/255 (55.29%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            S LET DPEI  +I+KE  RQ  G+ELIASEN  S AV+EA GS +TNKY+EG PG RYYGG EF D  ENL R R    F  +      NVQP+SGS AN A Y  VL+P D+I+ ++L  GGHL+H      G  ++ + I+ ES  Y V+  T  +DY  + E A   + K+I+CG SA PRE ++  F   +E+ G        +  +A +AG      L  TG   P P         T  K   GPRGG
Sbjct:    2 SYLETTDPEIAAIIDKETNRQINGLELIASENVVSRAVLEASGSIMTNKYAEGYPGKRYYGGCEFHDMAENLARDRVCSLFGAE----HANVQPHSGSQANMAVYFTVLKPSDKILSMNLSQGGHLSH------GSPVNFSGIIYESHQYGVDLKTERMDYGTIAEMARTIKPKIIVCGASAYPREIDFKAFAEISEEVG-----AYCVADIAHIAG------LCATGIH-PSPVGLTTFTTSTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43
Identity = 108/249 (43.37%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S LET DP + + I  E  RQ   +ELIASENF S AV+EA GS LTNKY+EG PG RYYGG   +D +ENL   RA + F  D      NVQP+SGS AN A Y +VL+P D I+G++L  GGHLTH      G  ++ +      +PY V+  T  ID+N++E  AL+ + KLI+ G SA PR  ++A F+  A+K G      + +  MA +AG       P      +     T K L  GPRGG
Sbjct:    2 SILETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTH------GSPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAYPRVLDFAAFRAIADKVG-----ALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-RGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43
Identity = 109/255 (42.75%), Postives = 148/255 (58.04%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+EA+GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY KL++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE-----IDAYMMVDMAHIAG------LVATGLH-PSPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43
Identity = 111/253 (43.87%), Postives = 142/253 (56.13%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L   DP I DLIE+E +RQ +G+ELIASEN+TS AV+EA GS LTNKY+EG+PG RYYGG EF+D IE L   RA Q F         NVQP+SG+ AN A +TA+L+P D I+G+ L  GGHLTHG   +   K            Y V++ TG IDY+ L  KA   R KLI  G SA PR  ++A+ +  A++ G      + +  +A +AG       L    + P P         T  K   GPRGG
Sbjct:    5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHGSPVNFSGKWYNVHF------YGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPRIIDFARMRQIADEVG-----ALLMADIAHIAG-------LVAAGEHPSPVGHAHVITTTTHKTLRGPRGG 235          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPD (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43
Identity = 110/249 (44.18%), Postives = 139/249 (55.82%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQ----PPTPKKLGGGPRGG 832
            L+  D E+ + +  E  RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F+       VNVQP+SGS AN A   +VL+P DRIMGLDL  GGHLTH      G  ++ +  L E+  Y V   TG ID N +EE A   R KLIICG SA  + +++  F+  A++        IG   MA +A P            +P       T  K   GPRGG
Sbjct:    6 LQMQDKEVFEAVVNETVRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFNCS----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTH------GSPVNFSGQLYEAHSYGVRRETGCIDMNMVEELANKVRPKLIICGASAYSQGFDFKAFREIADR--------IGALLMADIAHPAGLIVAGLLSDPVPHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS3 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9311) GN=glyA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.166e-42
Identity = 110/255 (43.14%), Postives = 146/255 (57.25%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPP-------TPKKLGGGPRGG 832
            N+SL+  DP I  LI++E+ RQ   +ELIASENFTS AV+EA GS LTNKY+EG+P  RYYGG E +D IE L  +RA Q F      W  NVQP+SG+ ANFA + A+L+P D I+G+DL  GGHLTH      G  ++ +      + Y V+  T  +D   + + AL+ + KLIICG SA PR  ++A F++ A++ G        L  MA +AG      L+  G      P       T  K   GPRGG
Sbjct:   10 NASLKAADPAIAGLIDQEQMRQETHLELIASENFTSKAVMEAQGSVLTNKYAEGLPHKRYYGGCEHVDAIEELAITRAKQLF---GAAW-ANVQPHSGAQANFAVFLALLQPGDTILGMDLSHGGHLTH------GSPVNVSGKWFNVVQYGVDKETQRLDMEAIRKLALEHKPKLIICGYSAYPRSIDFAAFRSIADEVGAYL-----LADMAHIAG------LVAAGVHASPVPHCDVVTTTTHKTLRGPRGG 243          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_PORG36.835e-4341.63Serine hydroxymethyltransferase OS=Porphyromonas g... [more]
GLYA_CHLAD6.835e-4344.66Serine hydroxymethyltransferase OS=Chloroflexus ag... [more]
GLYA_AMOA56.835e-4344.90Serine hydroxymethyltransferase OS=Amoebophilus as... [more]
GLYA_THEM48.926e-4342.52Serine hydroxymethyltransferase OS=Thermosipho mel... [more]
GLYA_METHJ8.926e-4343.14Serine hydroxymethyltransferase OS=Methanospirillu... [more]
GLYA_GEOMG8.926e-4343.37Serine hydroxymethyltransferase OS=Geobacter metal... [more]
GLYA_CLOBJ8.926e-4342.75Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CHLSY8.926e-4343.87Serine hydroxymethyltransferase OS=Chloroflexus au... [more]
GLYA_CHLPD8.926e-4344.18Serine hydroxymethyltransferase OS=Chlorobium phae... [more]
GLYA_SYNS31.166e-4243.14Serine hydroxymethyltransferase OS=Synechococcus s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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