EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAA (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 111/253 (43.87%), Postives = 142/253 (56.13%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L   DP I DLIE+E +RQ +G+ELIASEN+TS AV+EA GS LTNKY+EG+PG RYYGG EF+D IE L   RA Q F         NVQP+SG+ AN A +TA+L+P D I+G+ L  GGHLTHG   +   K            Y V++ TG IDY+ L  KA   R KLI  G SA PR  ++A+ +  A++ G      + +  +A +AG       L    + P P         T  K   GPRGG
Sbjct:    5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHGSPVNFSGKWYNVHF------YGVDAQTGQIDYDDLASKARAIRPKLITSGVSAYPRIIDFARMRQIADEVG-----ALLMADIAHIAG-------LVAAGEHPSPVGHAHVITTTTHKTLRGPRGG 235          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CARHZ (Serine hydroxymethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 108/250 (43.20%), Postives = 143/250 (57.20%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            N  L+ VDPEI + +EKE  RQ   IELIASENF S AV+EA+GS LTNKY+EG+PG RYYGG E++D +ENL R RA + F  +     VNVQP+SG+ AN AAY A LEP D ++G++L  GGHLTH      G  ++ +  L   + Y V   T  I+Y K+ E A   + K+I+ G SA PR  ++   +  A++ G        +  MA +AG       P       +    T K L  GPRGG
Sbjct:    5 NLRLKDVDPEIFEAMEKELSRQREKIELIASENFVSRAVMEAMGSHLTNKYAEGLPGKRYYGGCEYVDVVENLARERAKKLFGAE----HVNVQPHSGAQANMAAYMAFLEPGDTVLGMNLAHGGHLTH------GSPVNFSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVAGASAYPRVIDFKHLKEIADEVGAYL-----MVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTL-RGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.597e-42
Identity = 105/255 (41.18%), Postives = 147/255 (57.65%), Query Frame = 2
Query:   74 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            ++EW +  L  VDPE+   +++EK+RQ   IELIASENF S AV+EA GS LTNKY+EG PG RYYGG EF+D++E L   RA + F  +      NVQP+SG+ AN   Y A LEP D ++G++L  GGHLTH      G  ++ +      + Y V++ TG IDY+++   A + + KLI+ G SA PR  ++A+F+  A++ G        +  MA +AG       P      +     T K L  GPRGG
Sbjct:    1 MSEWKH--LHQVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAEGYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPGDTVLGMNLAHGGHLTH------GSPVNISGKYFRFVAYGVDAHTGRIDYDEVARIARETKPKLIVAGASAYPRVLDFARFRAIADEVGAML-----MVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-RGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBM (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.597e-42
Identity = 108/255 (42.35%), Postives = 148/255 (58.04%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+EA+GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY +L++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEQLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE-----IDAYMMVDMAHIAG------LVATGLH-PSPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBK (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.597e-42
Identity = 108/255 (42.35%), Postives = 149/255 (58.43%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+EA+GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY++L++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFVAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRIIDFEKIREICDE-----IDAYMMVDMAHIAG------LVATGIH-PSPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.597e-42
Identity = 108/255 (42.35%), Postives = 148/255 (58.04%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+EA+GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY +L++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEQLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE-----IDAYMMVDMAHIAG------LVATGLH-PSPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMHC (Serine hydroxymethyltransferase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.597e-42
Identity = 110/251 (43.82%), Postives = 142/251 (56.57%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGP----QIPQPPTPKKLGGGPRGG 832
            S+LE  D EI DL  KE +RQC  +E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE     R  + F  +      NVQP SGS AN   Y A ++P D+I+G+DL +GGHLTH      G K++A+     S  Y V    G IDYN++ + A   + KLI+CG SA PRE ++AKF+  A+  G      +   +   VAG        +T P     +    T K L  GPRGG
Sbjct:    2 SNLENFDKEIFDLTNKELQRQCDYLEMIASENFTYPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIEQTAIDRCKKLFGCN----FANVQPNSGSQANQGVYGAFIKPGDKILGMDLSNGGHLTH------GAKVNASGKFYSSFFYGVEMD-GRIDYNRVADIAKIVKPKLIVCGASAYPREIDFAKFREIADSVGAFLFADVAHIAGLVVAGE-------HTNPFPYCHVVSSTTHKTL-RGPRGG 233          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS9 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9902) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.392e-42
Identity = 110/256 (42.97%), Postives = 146/256 (57.03%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            N+ L + DPEI  LI++E+ RQ   +ELIASENF S AV++A GS LTNKY+EG+P  RYYGG E +D IE L   RA Q F      W  NVQP+SG+ ANFA + A+L+P D IMGLDL  GGHLTH      G  ++ +      + Y V+ +T  +D   + + AL+ + KLI+CG SA PR  ++A F++ A++ G        L  MA +AG      L+  G   P P         T  K   GPRGG
Sbjct:   10 NAGLASADPEISRLIDQERHRQETHLELIASENFASQAVMQAQGSVLTNKYAEGLPAKRYYGGCEHVDAIETLAIERAKQLF---DAAW-ANVQPHSGAQANFAVFLALLKPGDTIMGLDLSHGGHLTH------GSPVNVSGKWFNVVQYGVDPTTQRLDMEAIRKLALEHKPKLIVCGYSAYPRTIDFAAFRSIADEVG-----AFLLADMAHIAG------LVAAGVH-PSPVPHCDVVTTTTHKTLRGPRGG 243          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.392e-42
Identity = 107/249 (42.97%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S LET DP + ++I  E  RQ   +ELIASENF S AV+EA GS LTNKY+EG PG RYYGG   +D +ENL   RA + F  D     VNVQP+SGS AN A Y +VL+P D ++G++L  GGHLTH      G  ++ +  L   +PY V+  T  IDY + E  AL+ + K+I+ G SA PR  ++  F+  A+K G      + +  MA +AG       P      +     T K L  GPRGG
Sbjct:    2 SVLETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTH------GSPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVG-----AVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-RGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_THEYD (Serine hydroxymethyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glyA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.430e-42
Identity = 105/250 (42.00%), Postives = 143/250 (57.20%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWG----GPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SL  VD EI+ LI +EK+R+   I +IASEN+ S AV+EA GS  TNKY+EG PG RYYGG E+ DE+E L + RA Q F+++     VNVQP+SG+ AN A Y A+L+P D IMG+ L  GGHL+H      G  ++ T  L +++ Y VN  TGYID +++   A + + K+II G SA PR  ++  F   A++ G       A   GL + +    P      + T        T  K   GPRGG
Sbjct:    5 SLREVDAEIYSLILQEKKRETNKILMIASENYASRAVMEAQGSLFTNKYAEGYPGRRYYGGCEYADEVERLAQERAKQLFNVE----HVNVQPHSGTQANMAVYFAMLQPGDTIMGMSLTHGGHLSH------GSPVNFTGKLYKTVFYGVNKETGYIDMDEVRRLAQEHKPKIIITGASAYPRTIDFKAFSEIAKEVGAYLMADIAHIAGLIATSMHPSPVPYSDFITT--------TTHKTLRGPRGG 236          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_CHLAA1.989e-4243.87Serine hydroxymethyltransferase OS=Chloroflexus au... [more]
GLYA_CARHZ1.989e-4243.20Serine hydroxymethyltransferase OS=Carboxydothermu... [more]
GLYA_HELMI2.597e-4241.18Serine hydroxymethyltransferase OS=Heliobacterium ... [more]
GLYA_CLOBM2.597e-4242.35Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CLOBK2.597e-4242.35Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CLOB62.597e-4242.35Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CAMHC2.597e-4243.82Serine hydroxymethyltransferase OS=Campylobacter h... [more]
GLYA_SYNS93.392e-4242.97Serine hydroxymethyltransferase OS=Synechococcus s... [more]
GLYA_GEOSM3.392e-4242.97Serine hydroxymethyltransferase OS=Geobacter sp. (... [more]
GLYA_THEYD4.430e-4242.00Serine hydroxymethyltransferase OS=Thermodesulfovi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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