EY675124

Overview
NameEY675124
Unique NameEY675124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675124 vs. ExPASy Swiss-Prot
Match: SFR2B_HUMAN (Splicing factor, arginine/serine-rich 2B OS=Homo sapiens GN=SFRS2B PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.358e-11
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 3 
Query:  141 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAETRKRPEEMRQ 404
            +L V N+     P+ LR  FE++G V DVY+P++ +T  PRGFAFV+F D  +A +A+  M+G    GRE+ V +A   R+     RQ
Sbjct:   15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQ 102
The following BLAST results are available for this feature:
BLAST of EY675124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SFR2B_HUMAN8.358e-1140.91Splicing factor, arginine/serine-rich 2B OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-D10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675124 ID=EY675124; Name=EY675124; organism=Citrus sinensis; type=EST; length=973bp
GCTGTGCTATGAGAACGTACAGTCCACCATACTATAGTCCTCCGAGGAGG
GGATACGGAGGCCGAGGAAGAAGCCCTCCGAGAAGAGGATACGGTGGCGG
TGGAGGAGGCTATGGAAGACGCAAGGAACAGAATCATGGTAGCCTTTTGG
TTCGAAACATTCCGCTTGATTGCAGGCCTGAAGAACTCCGTGCTCCATTC
GAGAGGTTTGGGGTTGTTAGGGATGTCTACCTTCCTAAGGATTACTACAC
TGGGGAACCTCGAGGGTTTGCATTTGTGCAATTTGTGGATCCTTATGAAG
CTGCTGAAGCTCAACACCATATGAATGGGAAACGTTTTGCTGGGAGGGAA
ATATCTGTAGTCCTTGCTGCAGAGACAAGGAAAAGGCCGGAGGAGATGCG
CCAAAGACATAGGTTTAGAGGAGGGTCGAGCTATGGAGGACCGCGATCAT
CTTATTATGGACGTTATCGGTCCCGCTCACTATCCCGTTCACGTTCCCCT
CATCATCCTCAAGGTTCTAAGAAGCCGGTACCGCTCTAGATCTTACACTC
CTGTCCCAAGACAACCCGAAGATTTACTAATTTTCTCCTCGGAAAAGGCC
CATAAAACCCCCCAGAATCACCCAGAAGGTCCTCCCCAAAGAACGGAGTG
GCTGAATACAGGTCGTAAAATCAATTTTCCCCGGGGATTGGAAGATTTCC
CGCCGGAATCGTCCGTACCCCAAATGGGCAATGGGTTTAGGGGGGAAAAA
TCTGGGGCTTGAGGGGAACACACCGGGCTCCCTGGGGGGGGTCCCCCCCC
CCCCTCGTGGGGGGGGGTCGCGGGGGCCCCCCCCCCGGGGTTTTAAAATA
TTAAGGTGAATAGGTCACCCCCGCAAACGCGTGGCCGCCCCCACACTTAC
ACCCAAAAAAAGGATTTGATGGGGGAAAATTTTAAAAAATGGGAGAGAGG
GGGGAAGCACATATTTTTATTCG
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