EY675097

Overview
NameEY675097
Unique NameEY675097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length997
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675097 vs. ExPASy Swiss-Prot
Match: BURPA_ORYSJ (BURP domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=BURP10 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.758e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 1
Query:  208 LPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTMNHCEVP-PIEGETKICATSLESMLDFVHGTFGLETKFQVLSTKFLTKSTTIFQNYTILQVPKPM-FAPKMVACHIMPYPYAIFYCH--------NQMTENN*FGVSLGGDNGNKVEAVTFCHMETSHWN 681
            L R+ ADSIP S K    +L  FS      +A  ++  ++ CE   PI+GE + CATS+ES+++F     G     +  S     +       Y ++ V          V CH M +P+A+FYCH          + E+   G   G     K+EA+  CH++TS ++
Sbjct:  138 LRRDIADSIPVSTKNFADILAMFS-PISLVMADGIQSALDTCEHHRPIKGEERACATSIESVVEFAMSVLGTRD-LRAFSPDVPPEGIMPGNMYKVVAVRTVAGLRGDTVTCHTMRFPFAVFYCHAINPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDTSRFD 303          
BLAST of EY675097 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.998e-11
Identity = 42/165 (25.45%), Postives = 71/165 (43.03%), Query Frame = 1
Query:  208 LPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTMNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLSTKFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHNQMTENN*FGVSLGGDNGNKV-EAVTFCHMETSHWNQNYSSF 699
            LPR    ++PFS   +  + + F   ++S +A  +   ++ CE P   GETK C  S E M+DF     G     +       +K   +      +         + V+CH   YPY ++YCH+           L   +  K+   V  CH++TS W+ ++ +F
Sbjct:  436 LPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGD---VTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAF 597          
The following BLAST results are available for this feature:
BLAST of EY675097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
BURPA_ORYSJ1.758e-1129.76BURP domain-containing protein 10 OS=Oryza sativa ... [more]
Y639_ARATH2.998e-1125.45Probable polygalacturonase non-catalytic subunit A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-A07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675097 ID=EY675097; Name=EY675097; organism=Citrus sinensis; type=EST; length=997bp
TTTTCAGCTTGGAACCTCCTTCTTTCTCTACTCTTTCTGTGTGCTCCGGT
GCTTTCGGAGAATCTTCATGATTCTCATTCAATACCATCCCACATGAATC
ACATGGACCCTTCAACGATGGTGTTCTTCACCTTGAAGGATCTAAAGATT
GGCGAAACGATGCCGATTTATTTTCGCAAGAGAGATCCCTCAGCTTATCC
TCAGGCTTTGCCTAGAGAAGAAGCAGATTCCATTCCATTTTCATTGAAAC
AACTGCCTTACCTTCTTCAATTCTTCTCGTTCTCAGATGACTCACCCCTA
GCAAAAGCCATGGAAGGGACCATGAATCATTGCGAAGTTCCTCCCATCGA
AGGAGAAACCAAAATTTGTGCTACCTCTTTGGAATCCATGCTTGATTTTG
TACACGGAACTTTCGGATTGGAGACCAAATTCCAAGTTCTAAGCACAAAA
TTTCTCACAAAATCAACTACCATTTTCCAAAATTACACTATTTTACAAGT
GCCTAAACCAATGTTTGCTCCCAAGATGGTGGCATGTCATATCATGCCTT
ACCCTTATGCAATCTTCTACTGCCACAACCAAATGACTGAGAACAATTAA
TTCGGTGTTTCATTAGGTGGTGATAATGGAAATAAAGTGGAAGCTGTAAC
ATTTTGCCACATGGAAACGTCCCATTGGAATCAAAATTATTCCTCGTTTC
CTGGGGCTTGGGATCAAGCCAGGGAACCCCCCCCGTCGGCCATTTTCTTC
CGGGCGAAAAAAATTGGATAACATTCCCCCCCCCCAACCTACCCCTGAAT
AAAAAATGGTTTGGGGAATGGGGACTGGTTAAAACCCCATTTGTCCCAAC
CGTAAAAAAATTTAAAATCTTGGGGGGGGAAAAAAAAAGAATTTTTTTTA
ATTTTTTGAAAAAAGTTTTGGTTTACAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA
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