EY675074

Overview
NameEY675074
Unique NameEY675074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_VACCC (Ribonucleoside-diphosphate reductase large subunit OS=Vaccinia virus (strain Copenhagen) GN=I4L PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.274e-70
Identity = 142/232 (61.21%), Postives = 165/232 (71.12%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMM--GLFKKSQNSLKKLKRKTKTVWENPSK 726
            FDF KL +V  ++  NLNKIID+NYYP+  A  SN RHRPIGIGVQGLAD FILL   F+S EAQ LNK IFETIYY AL+ S E+A KEGPY+TY  S  S GILQ D+WNV+PSD W+W  L+D I   G+RNSLLVAPMPTAST+QILGNNE  EPYTSNIY+RRVLSGEF VVN HLL  LTE       +     N +M  G   ++ N  + +KR  KT+WE P K
Sbjct:  460 FDFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDSLEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNWEPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHLLRVLTER----KLWNDEIKNRIMADGGSIQNTNLPEDIKRVYKTIWEIPQK 687          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_VACCA (Ribonucleoside-diphosphate reductase large subunit OS=Vaccinia virus (strain Ankara) GN=MVA065L PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.274e-70
Identity = 142/232 (61.21%), Postives = 165/232 (71.12%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMM--GLFKKSQNSLKKLKRKTKTVWENPSK 726
            FDF KL +V  ++  NLNKIID+NYYP+  A  SN RHRPIGIGVQGLAD FILL   F+S EAQ LNK IFETIYY AL+ S E+A KEGPY+TY  S  S GILQ D+WNV+PSD W+W  L+D I   G+RNSLLVAPMPTAST+QILGNNE  EPYTSNIY+RRVLSGEF VVN HLL  LTE       +     N +M  G   ++ N  + +KR  KT+WE P K
Sbjct:  460 FDFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDSLEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNWEPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHLLRVLTER----KLWNDEIKNRIMADGGSIQNTNLPEDIKRVYKTIWEIPQK 687          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_DICDI (Ribonucleoside-diphosphate reductase large subunit OS=Dictyostelium discoideum GN=rnrA PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.837e-70
Identity = 139/237 (58.65%), Postives = 169/237 (71.31%), Query Frame = 1
Query:    7 VGSTGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRD-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWE 714
            VGST  K + FD + L E+T ++T NLN IID NYYPV  A+ SNLRHRPIGIG+QGLAD FI + M F+S  A +LN +I ETIY+ AL  S E+A ++G YE++  SP SKGILQ DMWNV PS RW+W  L+D +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VNK LL  L E+G + S   K +     G  +        LK   KTVWE
Sbjct:  478 VGSTDPKEKEFDHQFLFEITKLITVNLNVIIDRNYYPVAEAKTSNLRHRPIGIGIQGLADVFIKMRMPFDSVAAAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSPASKGILQFDMWNVTPSSRWNWAELKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTIVNKQLLEDLMELG-IWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWE 713          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_SCHPO (Ribonucleoside-diphosphate reductase large chain OS=Schizosaccharomyces pombe GN=cdc22 PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.408e-69
Identity = 139/234 (59.40%), Postives = 167/234 (71.37%), Query Frame = 1
Query:   25 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWENPSK 726
            K+  ++F+KL +V  +VT NLNKIIDVNYYPV  ARRSN+RHRP+G+GVQGLAD F  L + FES  A++LN  IFETIY+ AL+ S EIA  EG YE+Y  SP S+GILQ DMWNV P+D WDW  L++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN  LL  L E   L +   K K   + G  +      + LK   KTVWE   K
Sbjct:  456 KDGKYNFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFESAGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDWAELKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWLLKDLVERD-LWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQK 688          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_CRYPV (Ribonucleoside-diphosphate reductase large chain OS=Cryptosporidium parvum GN=RNR1 PE=3 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 2.402e-69
Identity = 137/236 (58.05%), Postives = 170/236 (72.03%), Query Frame = 1
Query:   28 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMM--GLFKKSQNSLKKLKRKTKTVWENPSK 726
            N+ FDF+KL EVT ++T NLNK+IDV YY ++  ++SNLRHRP+GIG+QGLAD F++L M +ES  A++LNK IFE IYY AL  S E+A K GPYETY  SP SKGILQ DMW V P S   DW +L+D ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN HLL+ L E+G    +  + K N +   G  +      + ++   KTVWE   K
Sbjct:  457 NKTFDFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCDWDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPHLLNDLLELGL---WDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQK 689          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_YEAST (Ribonucleoside-diphosphate reductase large chain 1 OS=Saccharomyces cerevisiae GN=RNR1 PE=1 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 9.127e-69
Identity = 136/241 (56.43%), Postives = 171/241 (70.95%), Query Frame = 1
Query:   13 STGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYL---VSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWENPSK 726
            S   K   ++F+KL E+  +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S EA+ LN  IFETIY+ +++ S E+A K+GPYET+  SP S+GILQ DMW+  P   WDW  LR  I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +LL  L ++G     +  Y  T+  ++ GL     N  ++LK   KTVWE   K
Sbjct:  457 SEDGKTSTYNFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGL----PNVPQELKDLYKTVWEISQK 693          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR3_YEAST (Ribonucleoside-diphosphate reductase large chain 2 OS=Saccharomyces cerevisiae GN=RNR3 PE=1 SV=4)

HSP 1 Score: 260.381 bits (664), Expect = 1.192e-68
Identity = 135/241 (56.02%), Postives = 167/241 (69.29%), Query Frame = 1
Query:   13 STGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGY---LVSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWENPSK 726
            S   K   ++FE+L E+  ++T NLN++ID NYYPV  AR SN++HRPI +GVQGLADT+++L + FES EAQ LNK IFETIY+  L+ S E+A KEG Y T+  SP SKGILQ DMWN  P   WDW  LR  I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +LL  L ++G     +  Y  T+  ++ GL     N  ++LK   KTVWE   K
Sbjct:  457 SEDGKTASYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYLLRDLVDLGIWDDSMKQYLITQNGSIQGL----PNVPQELKELYKTVWEISQK 693          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_PLAF4 (Ribonucleoside-diphosphate reductase large subunit OS=Plasmodium falciparum (isolate Dd2) GN=RNR1 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 7.232e-66
Identity = 136/231 (58.87%), Postives = 163/231 (70.56%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWENPSK 726
            F+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL   +ES  A++LNK IFET+YY AL+ S E+A+  GPYE+Y  SP S+GILQ DMWN  + +  WDW  L+  I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN HLL  L + G L     K +     G  +        LK   KTVWE   K
Sbjct:  460 FNFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYESDAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWDWDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPHLLKDLFDRG-LWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQK 689          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_TRYBB (Ribonucleoside-diphosphate reductase large subunit OS=Trypanosoma brucei brucei GN=RNR1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 8.275e-62
Identity = 120/205 (58.54%), Postives = 148/205 (72.20%), Query Frame = 1
Query:   25 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEM 600
            K+  FD+  L EVT +VT NLN++ID N+YPV  AR SNLRHRP+GIGVQGLAD F LL + F  PEA++LN+ IFETIY  A++ S+E+A K+GPYET+  SP S+G LQ D+W+     R             WDW  L++ + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNKHL+  L  +
Sbjct:  466 KDGAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLPFAHPEAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIRGMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKHLVKELIRL 670          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_PLAFG (Ribonucleoside-diphosphate reductase large subunit OS=Plasmodium falciparum (isolate FCR-3 / Gambia) GN=RNR1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 8.275e-62
Identity = 132/231 (57.14%), Postives = 160/231 (69.26%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWENPSK 726
            F+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL   +ES  A++LNK I+ET+YY AL+ S +   + GPYE+Y  SP S+GILQ DMWN  + +  WDW  L+  I+K G+RN LL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN HLL  L + G L     K +     G  +        LK   KTVWE   K
Sbjct:  460 FNFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYLYESDAAKELNKRIYETMYYAALEMSVD-WLQSGPYESYQGSPGSQGILQFDMWNAKVDNKYWDWDELKLKIAKTGLRNLLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPHLLKDLFDRG-LWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQK 688          
The following BLAST results are available for this feature:
BLAST of EY675074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
RIR1_VACCC1.274e-7061.21Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_VACCA1.274e-7061.21Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_DICDI2.837e-7058.65Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_SCHPO1.408e-6959.40Ribonucleoside-diphosphate reductase large chain O... [more]
RIR1_CRYPV2.402e-6958.05Ribonucleoside-diphosphate reductase large chain O... [more]
RIR1_YEAST9.127e-6956.43Ribonucleoside-diphosphate reductase large chain 1... [more]
RIR3_YEAST1.192e-6856.02Ribonucleoside-diphosphate reductase large chain 2... [more]
RIR1_PLAF47.232e-6658.87Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_TRYBB8.275e-6258.54Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_PLAFG8.275e-6257.14Ribonucleoside-diphosphate reductase large subunit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-F08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675074 ID=EY675074; Name=EY675074; organism=Citrus sinensis; type=EST; length=994bp
AGGATTGTTGGGAGCACAGGTTCTAAAAATAGATTTTTTGACTTTGAAAA
ATTAGCTGAGGTTACTGCAATTGTTACTGAAAACCTTAACAAAATAATTG
ATGTTAATTACTACCCTGTTGAAACTGCCAGAAGGTCAAATTTGCGACAT
AGACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACT
TGGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAGACATAT
TTGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCA
AAAGAAGGTCCTTATGAAACATATCATAATAGCCCTGTGAGCAAGGGAAT
TCTCCAACCCGACATGTGGAATGTAATTCCATCAGATCGATGGGACTGGG
GAGTACTTAGAGATATGATATCAAAGAATGGAGTGAGAAATTCACTTCTT
GTAGCACCAATGCCAACTGCCTCGACCAGCCAGATTCTCGGAAACAATGA
GTGCTTTGAGCCATATACTTCTAACATCTACAGTCGCAGAGTTCTAAGTG
GTGAATTTGTTGTAGTGAACAAACATCTTCTTCACCACTTAACTGAGATG
GGGTATTTGGTCTCCTACTATTAAAAAACAAAATAAAATACGATGATGGG
TCTGTTCAAAAAATCCCAAAATTCCCTGAAGAAATTAAAAAGAAAAACAA
AAACTGTTTGGGAAAATCCAAGCAAAAAACCCTGGGTGATAAGGGCTGGT
TGATAAAAGGGGGGTTATTAAAAACCAAAATCCAAAACCCTATATATTCC
CCCTGGGTTTCAACCCAAATTTTTAAAAAAAGGGGACTTTTCTTTTCCTT
TTTCCCCAAAACGGGGGGTCAAAGGGGGGAAAATAAAAAAAAAAGGAAAA
AAGAGGACACATTACTCCCCCCGGGGCCCCCACGGGGCCTCTGCGCGCGC
TCGAAAGAGGCGCCCCCCCCCCAAAAAATTTTTTTTTAATGAGT
back to top