EY675074

Overview
NameEY675074
Unique NameEY675074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_OSHV1 (Ribonucleoside-diphosphate reductase large subunit OS=Ostreid herpesvirus 1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.194e-25
Identity = 77/261 (29.50%), Postives = 129/261 (49.43%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARR----------------------------SNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYH--NSPVSKGILQPDMWNVIPSDR------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGYLVSYY*KTK*NTMMGLFKKSQNSLKKLKRKTKTVWE 714
            DFE +A+   +  + +N +ID   Y +   +                             SNL+HRP GIG+QGL D F+ L + ++S  A +L   I E IYY A++ S +IA ++GPY +Y+  N+   +G LQ D       DR      ++W  +     K G+ NS++ A  P+AS+SQ+  N E  E  TSN +++ +  G+F+++NKHL   L ++G   +         M+G  + +  S++ ++R  K + E
Sbjct:  483 DFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVNGIKFDAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAVRESVKIAEEKGPYPSYYWDNNTHREGKLQFDFLEGFDRDRDLTHELFNWREVLKKFEKFGINNSVVTAQPPSASSSQLNDNVESIEAITSNRFTKGIKDGKFIIINKHLQKDLEDLGMWDA--------QMVGDIEANDGSIQNIERIPKNIRE 735          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_EHV4 (Ribonucleoside-diphosphate reductase large subunit OS=Equine herpesvirus 4 (strain 1942) PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.203e-22
Identity = 65/186 (34.95%), Postives = 107/186 (57.53%), Query Frame = 1
Query:   34 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG--PYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 582
            +FDF  L    A  T  +N ++  + YP   +++    +R +G+G+QGL  TF++L +   SPEA QLNK I E +  +++K S+ +  K G  P++ + +S  S+G L  D + NV  ++R  W  LR  I + G+ NS  VA MPT S+SQ+  ++E F P  +N++S+   +GE +  N  L+
Sbjct:  475 YFDFAALGRAAATATIFVNAMMCASTYPTVKSQKGVEENRSLGLGIQGLHTTFLMLDLDMASPEAHQLNKQIAERLLLNSMKASATL-CKLGMQPFKGFEDSKYSRGELPFDAYPNVTLTNRNAWRRLRTDIKQYGLYNSQFVAYMPTVSSSQVTESSEGFSPVYTNLFSKVTATGEVLRPNVLLM 659          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_SHV21 (Ribonucleoside-diphosphate reductase large subunit OS=Saimiriine herpesvirus 2 (strain 11) GN=61 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.436e-21
Identity = 67/178 (37.64%), Postives = 95/178 (53.37%), Query Frame = 1
Query:   16 TGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAA--KEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 537
            T S    FDF KL          +N  I ++  P  +A     R R +GIG  GLAD F  +G  +   E++ L++DIFET+YY A+KTSSEI +  K  P+  +  S ++ G+     W+ +P       W  L+D I K GV NS  +A MPTA TSQ+ G  + F PY +N+ S+
Sbjct:  427 TCSNTAQFDFSKLEYAVQAAVFIINACI-LSPSPTSSATVGQ-RERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTAVKTSSEICSVGKGQPFAGFRKSKLAHGVFHWATWDAMPQRVPMKQWIHLQDNIKKFGVFNSQFIALMPTAGTSQLTGYTDSFYPYFANMSSK 602          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_EHV1B (Ribonucleoside-diphosphate reductase large subunit OS=Equine herpesvirus 1 (strain Ab4p) GN=21 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.436e-21
Identity = 62/185 (33.51%), Postives = 103/185 (55.68%), Query Frame = 1
Query:   34 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIA-AKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 582
            +FDF  L    A  T  +N ++    YP   ++R    +R +G+G+QGL   F++L +   SPEA+QLNK I E +  +++K S+ +      P++ + +S  S G L  D +  V  ++R  W  LR  I ++G+ NS  VA MPT S+SQ+  ++E F P  +N++S+   +GE +  N  L+
Sbjct:  476 YFDFAALGRAAATATIFVNSMMRAGTYPTVKSQRGVDENRSLGLGIQGLHTAFLMLDLDMASPEARQLNKQIAERLLLNSMKASATLCRLGMKPFKGFEDSKYSLGELPFDSYPGVTLANRNAWRRLRTEIKQHGLYNSQFVAYMPTVSSSQVTESSEGFSPVYTNLFSKVTATGEVLRPNLLLM 660          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_BHV1C (Ribonucleoside-diphosphate reductase large subunit OS=Bovine herpesvirus 1.1 (strain Cooper) GN=UL39 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.155e-21
Identity = 63/187 (33.69%), Postives = 101/187 (54.01%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKE-GPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHL 591
            FDF  L+   A     +N ++    YP E A R   RHR +GIG QGL    + LGM   SP A++LN +I E +    + TS+ +      P+E +  S  ++G++  D +  V+ S    W  LR+ ++++G+ N+  VA MPT S+SQ+   +E F P  +N++S+  +SGE +  N  L+  L
Sbjct:  474 FDFAALSTAAATAAIFVNAMMLGGQYPTEKAARGVARHRSLGIGFQGLHTLLLELGMDMLSPAARRLNVEIAERLLLAVMATSATLCEYGCAPFEDFARSKFARGLMPFDGYEGVVLSLPRAWARLREKVARHGLYNAQFVALMPTVSSSQVTEGSEGFSPVFTNMFSKVTMSGELLRPNLPLMRAL 660          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_HELPY (Ribonucleoside-diphosphate reductase subunit alpha OS=Helicobacter pylori GN=nrdA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.693e-20
Identity = 62/187 (33.16%), Postives = 96/187 (51.34%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN---------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 579
            E +  V  I+   L+ +ID+N+YP    + +NL++R IG+GV G A       +A+ S E  +    + E I YHA+ TS+ +A ++G Y+ + NS  SKGI   D  N          + +   DW  LR+ +  NG+RN  L+A  PT+S S ++G  +  EP     +    LSG   VV  +L
Sbjct:  511 EDIKRVVPIMVRLLDNVIDLNFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPNL 697          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_HELPJ (Ribonucleoside-diphosphate reductase subunit alpha OS=Helicobacter pylori J99 GN=nrdA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.693e-20
Identity = 62/187 (33.16%), Postives = 96/187 (51.34%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN---------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 579
            E +  V  I+   L+ +ID+N+YP    + +NL++R IG+GV G A       +A+ S E  +    + E I YHA+ TS+ +A ++G Y+ + NS  SKGI   D  N          + +   DW  LR+ +  NG+RN  L+A  PT+S S ++G  +  EP     +    LSG   VV  +L
Sbjct:  511 EDIKRVVPIMVRLLDNVIDLNFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEPIYKKKWFEENLSGLIPVVVPNL 697          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_AQUAE (Ribonucleoside-diphosphate reductase subunit alpha OS=Aquifex aeolicus GN=nrdA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.593e-20
Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 552
            E++ EV  ++   L+ +I++N+Y +  A  +N R+R IGIGV       +  G+ +ES E  +    +FE I ++ALK S E+A + G Y+ +  S  SKGIL       I        +   W  L + I K G+RN+ L+A MPT STS ILG     +P  +  Y    +SG
Sbjct:  535 EEIKEVLPLLVRMLDNVIEMNFYAIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIKWESEEHLKFADKLFELIAFYALKGSLELAKERGRYKLFDGSNWSKGILFGRSVEEIEENSRQNGNNLPWRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDPIFARFYKEENMSG 709          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_HHV11 (Ribonucleoside-diphosphate reductase large subunit OS=Human herpesvirus 1 (strain 17) GN=UL39 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.336e-19
Identity = 65/190 (34.21%), Postives = 94/190 (49.47%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGILQPDMWNVIPSDR----WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHL 591
            FDF +L +        +N +ID    P     R N   R +GIG+QGL    + LG+  ES E Q LNK I E +   A+KTS+ +  +   P+  +  S    G      W   P  R     +W +LR  + K+G+RNS  VA MPTA+++QI   +E F P  +N++S+    GE +  N  LL  L
Sbjct:  824 FDFGRLRDAVQACVLMVNIMIDSTLQPTPQCTRGNDNLRSMGIGMQGLHTACLKLGLDLESAEFQDLNKHIAEVMLLSAMKTSNALCVRGARPFNHFKRSMYRAGRFH---WERFPDARPRYEGEWEMLRQSMMKHGLRNSQFVALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPNTLLLKEL 1010          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_SUHVK (Ribonucleoside-diphosphate reductase large subunit OS=Suid herpesvirus 1 (strain Kaplan) GN=RR1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.280e-19
Identity = 57/190 (30.00%), Postives = 99/190 (52.11%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKE-GPYETYHNSPVSKGILQPDMWNVIP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEM 600
            FDF  L     +    +N ++ +  YP   +     R R +GIG+QGL  T + L M    P A++LN  I E + Y  +  S E+  +   P++ + +S  ++G++  D +  +   +   W  LR  I+++GV N+  VA MPT S+SQ+  ++E F P  +N++S+  +SGE +  N  L+  L  +
Sbjct:  522 FDFAALRRAARVAAVFVNAMMRIGNYPTGASVEGVRRSRSLGIGLQGLHTTVLALDMDMADPAARRLNAAIAEELLYGVMDASVELCERGLRPFDGFEHSRYARGVMPFDAYERVSLREPMRWDALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSPTFTNMFSKVTISGELLRPNLPLMETLRRL 711          
The following BLAST results are available for this feature:
BLAST of EY675074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
RIR1_OSHV16.194e-2529.50Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_EHV42.203e-2234.95Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_SHV212.436e-2137.64Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_EHV1B2.436e-2133.51Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_BHV1C4.155e-2133.69Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HELPY2.693e-2033.16Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_HELPJ2.693e-2033.16Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_AQUAE4.593e-2034.29Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_HHV111.336e-1934.21Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_SUHVK2.280e-1930.00Ribonucleoside-diphosphate reductase large subunit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-F08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675074 ID=EY675074; Name=EY675074; organism=Citrus sinensis; type=EST; length=994bp
AGGATTGTTGGGAGCACAGGTTCTAAAAATAGATTTTTTGACTTTGAAAA
ATTAGCTGAGGTTACTGCAATTGTTACTGAAAACCTTAACAAAATAATTG
ATGTTAATTACTACCCTGTTGAAACTGCCAGAAGGTCAAATTTGCGACAT
AGACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACT
TGGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAGACATAT
TTGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCA
AAAGAAGGTCCTTATGAAACATATCATAATAGCCCTGTGAGCAAGGGAAT
TCTCCAACCCGACATGTGGAATGTAATTCCATCAGATCGATGGGACTGGG
GAGTACTTAGAGATATGATATCAAAGAATGGAGTGAGAAATTCACTTCTT
GTAGCACCAATGCCAACTGCCTCGACCAGCCAGATTCTCGGAAACAATGA
GTGCTTTGAGCCATATACTTCTAACATCTACAGTCGCAGAGTTCTAAGTG
GTGAATTTGTTGTAGTGAACAAACATCTTCTTCACCACTTAACTGAGATG
GGGTATTTGGTCTCCTACTATTAAAAAACAAAATAAAATACGATGATGGG
TCTGTTCAAAAAATCCCAAAATTCCCTGAAGAAATTAAAAAGAAAAACAA
AAACTGTTTGGGAAAATCCAAGCAAAAAACCCTGGGTGATAAGGGCTGGT
TGATAAAAGGGGGGTTATTAAAAACCAAAATCCAAAACCCTATATATTCC
CCCTGGGTTTCAACCCAAATTTTTAAAAAAAGGGGACTTTTCTTTTCCTT
TTTCCCCAAAACGGGGGGTCAAAGGGGGGAAAATAAAAAAAAAAGGAAAA
AAGAGGACACATTACTCCCCCCGGGGCCCCCACGGGGCCTCTGCGCGCGC
TCGAAAGAGGCGCCCCCCCCCCAAAAAATTTTTTTTTAATGAGT
back to top