EY675074

Overview
NameEY675074
Unique NameEY675074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_VZVO (Ribonucleoside-diphosphate reductase large subunit OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF19 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG--PYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEM 600
            D +  A  T I    LN ++    +P + + +    +R +GIG+QGL  T + LG    S  A++LN  I E + Y  +KTS E+    G  P++ +  S  +KG L  D ++ I      W  LRD I   G+ NS  +A MPT S++Q+   +E F P  +N++S+   SGE +  N  L+  L +M
Sbjct:  466 DLQLTARTTVIF---LNGVLAAGNFPCKKSCKGVKNNRSLGIGIQGLHTTCLRLGFDLTSQPARRLNVQIAELMLYETMKTSMEMCKIGGLAPFKGFTESKYAKGWLHQDGFSTISYLDLPWCTLRDDICAYGLYNSQFLALMPTVSSAQVTECSEGFSPIYNNMFSKVTTSGELLRPNLDLMDELRDM 651          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_VZVD (Ribonucleoside-diphosphate reductase large subunit OS=Varicella-zoster virus (strain Dumas) GN=ORF19 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG--PYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEM 600
            D +  A  T I    LN ++    +P + + +    +R +GIG+QGL  T + LG    S  A++LN  I E + Y  +KTS E+    G  P++ +  S  +KG L  D ++ I      W  LRD I   G+ NS  +A MPT S++Q+   +E F P  +N++S+   SGE +  N  L+  L +M
Sbjct:  466 DLQLTARTTVIF---LNGVLAAGNFPCKKSCKGVKNNRSLGIGIQGLHTTCLRLGFDLTSQPARRLNVQIAELMLYETMKTSMEMCKIGGLAPFKGFTESKYAKGWLHQDGFSTISYLDLPWCTLRDDICAYGLYNSQFLALMPTVSSAQVTECSEGFSPIYNNMFSKVTTSGELLRPNLDLMDELRDM 651          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_HHV2H (Ribonucleoside-diphosphate reductase large subunit OS=Human herpesvirus 2 (strain HG52) GN=UL39 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.930e-18
Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHL 591
            FDF +L +        +N +ID    P     R N   R +GIG+QGL    + +G+  ES E + LN  I E +   A+KTS+ +  +   P+  +  S    G    + + N  P    +W +LR  + K+G+RNS  +A MPTA+++QI   +E F P  +N++S+    GE +  N  LL  L
Sbjct:  829 FDFGRLRDAVQACVLMVNIMIDSTLQPTPQCTRGNDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTHIAEVMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWERFSNASPRYEGEWEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPNTLLLKEL 1015          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_HHV23 (Ribonucleoside-diphosphate reductase large subunit OS=Human herpesvirus 2 (strain 333) PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.333e-18
Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 1
Query:   31 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHL 591
            R FDF  L +        +N +ID    P     R +   R +GIG+QGL    + +G+  ES E + LN  I E +   A+KTS+ +  +   P+  +  S    G    + + N  P    +W +LR  + K+G+RNS  +A MPTA+++QI   +E F P  +N++S+    GE +  N  LL  L
Sbjct:  829 RTFDFGMLRDAVQACVLMVNIMIDSTLQPTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTHIAEVMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWERFSNASPRYEGEWEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGETLRPNTLLLKEL 1017          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_HAEIN (Ribonucleoside-diphosphate reductase subunit alpha OS=Haemophilus influenzae GN=nrdA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.806e-16
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD------RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            + ++L E+  +   +L+ ++D   YPV  A+RS+L  R +GIGV   A      G+ +    A  L    FE I Y+ LK S  +A ++G  E ++ +  +KGIL  D +             +DW  LR  I + G+RNS L A MP+ ++SQI       EP
Sbjct:  474 NLDELEELADLAVRSLDALLDYQDYPVVAAKRSSLARRSLGIGVINYAYYLAKNGVRYSDGSANDLTHRTFEAIQYYLLKASMNLAKEQGACEYFNETTYAKGILPIDTYKKDLDSLTQEPLHYDWESLRKDIQEFGLRNSTLTALMPSETSSQISNATNGIEP 637          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_ECOLI (Ribonucleoside-diphosphate reductase 1 subunit alpha OS=Escherichia coli (strain K12) GN=nrdA PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.806e-16
Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW----NVIPSD--RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            + ++L E+  +    L+ ++D   YP+  A+R  +  R +GIGV   A      G  +    A  L    FE I Y+ LK S+E+A ++G    ++ +  +KGIL  D +    + I ++   +DW  LR+ I  +G+RNS L A MP+ ++SQI       EP
Sbjct:  474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_SALTY (Ribonucleoside-diphosphate reductase 1 subunit alpha OS=Salmonella typhimurium GN=nrdA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.255e-16
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            ++L E+  +    L+ ++D   YP+  A+R  +  R +GIGV   A      G  +    A  L    FE I Y+ LK S+E+A ++G    ++ +  +KGIL  D +       V     +DW  LR+ I  +G+RNS L A MP+ ++SQI       EP
Sbjct:  476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYWLAKNGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIVNEPLHYDWEQLRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_BUCBP (Ribonucleoside-diphosphate reductase subunit alpha OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nrdA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.964e-16
Identity = 55/171 (32.16%), Postives = 81/171 (47.37%), Query Frame = 1
Query:   19 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD------RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            GS N   D  KL+    ++   L+ ++D   YP+ +A++S L  R +GIGV   A      G+ +    A  L    FE I YH L  S  +A ++G    + ++   KGIL  D +     +        DW +LR  I K G+RNS L A MP+ ++SQI       EP
Sbjct:  470 GSLNNLNDLSKLSN---LIVRALDSVLDYQEYPILSAKKSALSRRTLGIGVINFAYYLAKNGVRYSDGSANNLTHRTFEAIQYHLLNASCVLAQEKGACHWFSHTNYYKGILPIDTYKKNVDEICNEPLHLDWELLRKKIKKYGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_BPT4 (Ribonucleoside-diphosphate reductase subunit alpha OS=Enterobacteria phage T4 GN=NRDA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.964e-16
Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHHLTEMGY 606
            D +K+ E+  +    L+ ++D   YPV  A ++  R R +G+GV   A        ++E  +A  L  ++FE + Y  +K S ++A ++GP E Y ++  S+G L  D +N        P    DW  LR+ +   G+RNS L A MP  S+SQ+  +   +EP    +  +    G F  V  ++ H++    Y
Sbjct:  471 DQDKINELAEVQVRALDNLLDYQGYPVPEAEKAKKR-RNLGVGVTNYAAWLASNFASYE--DANDLTHELFERLQYGLIKASIKLAKEKGPSEYYSDTRWSRGELPIDWYNKKIDQIAAPKYVCDWSALREDLKLFGIRNSTLSALMPCESSSQVSNSTNGYEPPRGPVSVKESKEGSFNQVVPNIEHNIDLYDY 662          
BLAST of EY675074 vs. ExPASy Swiss-Prot
Match: RIR1_TREPA (Ribonucleoside-diphosphate reductase subunit alpha OS=Treponema pallidum GN=nrdA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.390e-14
Identity = 52/158 (32.91%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            D ++L EV  +    L+ +ID+ YYPV  A+ +N  +R IG+GV G        G+ +ES E       IFE I   A++ S  IA ++G Y  +  S    G        V      DW  L+  ++ +G+RN  L+A  PT+STS I G     +P
Sbjct:  588 DDKELREVVRVAVRALDNVIDLTYYPVPYAQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDEHLAFADRIFERINRAAIEASMTIAREKGAYGCFTGSDWCTGAYFRKRGYVSE----DWQRLQREVATHGMRNGYLLAVAPTSSTSIIAGTTAGVDP 741          
The following BLAST results are available for this feature:
BLAST of EY675074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
RIR1_VZVO3.888e-1932.80Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_VZVD3.888e-1932.80Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HHV2H1.930e-1832.09Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HHV237.333e-1831.75Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HAEIN1.806e-1632.32Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_ECOLI1.806e-1631.10Ribonucleoside-diphosphate reductase 1 subunit alp... [more]
RIR1_SALTY5.255e-1631.48Ribonucleoside-diphosphate reductase 1 subunit alp... [more]
RIR1_BUCBP8.964e-1632.16Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_BPT48.964e-1628.72Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_TREPA8.390e-1432.91Ribonucleoside-diphosphate reductase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-F08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675074 ID=EY675074; Name=EY675074; organism=Citrus sinensis; type=EST; length=994bp
AGGATTGTTGGGAGCACAGGTTCTAAAAATAGATTTTTTGACTTTGAAAA
ATTAGCTGAGGTTACTGCAATTGTTACTGAAAACCTTAACAAAATAATTG
ATGTTAATTACTACCCTGTTGAAACTGCCAGAAGGTCAAATTTGCGACAT
AGACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACT
TGGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAGACATAT
TTGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCA
AAAGAAGGTCCTTATGAAACATATCATAATAGCCCTGTGAGCAAGGGAAT
TCTCCAACCCGACATGTGGAATGTAATTCCATCAGATCGATGGGACTGGG
GAGTACTTAGAGATATGATATCAAAGAATGGAGTGAGAAATTCACTTCTT
GTAGCACCAATGCCAACTGCCTCGACCAGCCAGATTCTCGGAAACAATGA
GTGCTTTGAGCCATATACTTCTAACATCTACAGTCGCAGAGTTCTAAGTG
GTGAATTTGTTGTAGTGAACAAACATCTTCTTCACCACTTAACTGAGATG
GGGTATTTGGTCTCCTACTATTAAAAAACAAAATAAAATACGATGATGGG
TCTGTTCAAAAAATCCCAAAATTCCCTGAAGAAATTAAAAAGAAAAACAA
AAACTGTTTGGGAAAATCCAAGCAAAAAACCCTGGGTGATAAGGGCTGGT
TGATAAAAGGGGGGTTATTAAAAACCAAAATCCAAAACCCTATATATTCC
CCCTGGGTTTCAACCCAAATTTTTAAAAAAAGGGGACTTTTCTTTTCCTT
TTTCCCCAAAACGGGGGGTCAAAGGGGGGAAAATAAAAAAAAAAGGAAAA
AAGAGGACACATTACTCCCCCCGGGGCCCCCACGGGGCCTCTGCGCGCGC
TCGAAAGAGGCGCCCCCCCCCCAAAAAATTTTTTTTTAATGAGT
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