EY675057

Overview
NameEY675057
Unique NameEY675057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675057 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.598e-15
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 1 
Query:  409 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEK-GPSETNAALEFAVNTLEIQ 615
            +  LAK QSPKF+V AC+DSRVCPS+IL  QPGE F++RN+AN+VPP +    S   AA+E+AV  L+++
Sbjct:    5 YGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVE 74
[Close]
BLAST of EY675057 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.415e-11
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 
Query:  364 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEKGPSETNAALEFAVNTLEIQIYYLLEQMDWGRIQA 660
            FL F+++ Y    + F++LA  Q+PK + IAC+DSRV P  +   +PGE F+IRN  N+VP     P   +A++E+AV  L +    +    D G + A
Sbjct:    8 FLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAVLGVGDIVVCGHSDCGAMGA 106
[Close]
BLAST of EY675057 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.117e-11
Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 1 
Query:  367 LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLE--KGPSETNAALEFAVNTLEIQIYYLLEQMDWG 648
            L F++N+Y E  E +++L   Q P  + I+C DSRV P+ I G QPGE ++IRN+ N++PP    K    T A++E+A+  + +Q   +    D G
Sbjct:    8 LEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCG 103
The following BLAST results are available for this feature:
BLAST of EY675057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CAH2_FLALI3.598e-1555.71Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]
CYNT_PSEAE1.415e-1137.37Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_HELPJ4.117e-1137.50Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-D09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675057 ID=EY675057; Name=EY675057; organism=Citrus sinensis; type=EST; length=1036bp
CACGCGTCCGCGTTTAACGACTTTCCCCTTAGCAAAGGCGGGAAGATAAA
AATGGTCTACTCAATCCCATCAAAATCTCGTTCTATTATCTCGTCCATGG
CAGCTCTAAAAACTTCCGTTGAATCTACATTTGCCAGTTCTCCCATAAAC
CGCCCGGCTGGTTCAAAGACTATGAAATTGGAGAAAATTCGTGATGCCCA
GCAAGGATTTACTCCTGTATTGAAGAGAAGATCATTTTCGAAATTAGAGA
CTTCATCTTCAAGCACTGCCGCAGCACTGACTCGAGATCGTACAAGCTAT
AAAGTGCAAGATGTGGCCAAATCTTGCGGTGGGTTGGACTATTTTGAAGA
GATGAAACAGAGGTTTCTCAGCTTTAAGAAGAACAAATATTTCGAAGAGT
TGGAGCATTTTCAAAATCTTGCCAAAGCTCAATCACCAAAGTTTATGGTG
ATTGCTTGTGCAGACTCTAGGGTATGTCCCTCTTACATCCTCGGACTCCA
ACCTGGAGAAACTTTTATGATTCGTAATGTTGCTAATCTTGTTCCCCCGC
TTGAAAAAGGACCATCAGAAACTAATGCCGCCCTCGAGTTTGCAGTCAAT
ACACTCGAAATTCAAATATATTATTTATTGGAACAAATGGACTGGGGAAG
AATTCAAGCCCCTTATAAAAATGCAAAACAACGTAAACTTCAAAACAAAA
CTTAAATGAAAAACTGGGGGTTGGGAAAGGCTAAAGTTGCCAATTTTAAA
AAAAAAACCTTAAACCGCCCAACCTTACCTTTAACCAACAAAGGCAGGGG
CTTGGGCAGAAAAGGAAACCGATTCACCCTTTTCAAAAAATTAAATTTGG
TTAACAATCCCCCGGGGGAAAAAAAAAAAAAAGGTCGCGGGGAAAAAAGT
TATCATTTTTTTTTTTTTGGGGGGGGGAAAAATTTAATAGATTTTTTTTT
AAAATTTGGTCCATCTTTTTTGAAAAAAAGGGAGCGAACCCGGGGGAGAT
AAAAAAAAGGGGGGAGGAAAAAAACCAAAAATATTG
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