EY675056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS3_FLAPR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.864e-22 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGF+ V+ ISF Sbjct: 96 LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISF 165
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.864e-22 Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISFPCWPAP 658 L+ +VYRE+H SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGF+ + V+ +SF + P Sbjct: 103 LEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPP 178 HSP 2 Score: 72.7886 bits (177), Expect = 3.509e-12 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWPP G KKFETLSYLPPLSD LL ++ YLL +GWIPC Sbjct: 57 CMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPC 98
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS2_FLAPR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Flaveria pringlei GN=RBCS2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.864e-22 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGF+ V+ ISF Sbjct: 101 LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISF 170
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.864e-22 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGF+ V+ ISF Sbjct: 96 LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISF 165
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.380e-22 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGF+ V+ I F Sbjct: 101 LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMF 170 HSP 2 Score: 70.0922 bits (170), Expect = 2.274e-11 Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWPP GLKK+ETLSYLPPL++ L KE+ YLLR W+PC Sbjct: 55 CMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPC 96
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS1_AMAHP (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.380e-22 Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ +VYRE+H SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGF+ + V+ +SF Sbjct: 105 LEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSF 174 HSP 2 Score: 72.4034 bits (176), Expect = 4.582e-12 Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWPP G KKFETLSYLPPLSD LL ++ YLL GWIPC Sbjct: 59 CMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPC 100
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.332e-22 Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ +VYRE+H SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGF+ + V+ +SF Sbjct: 106 LEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSF 175 HSP 2 Score: 72.4034 bits (176), Expect = 4.582e-12 Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWPP G KKFETLSYLPPLSD LL ++ YLL GWIPC Sbjct: 60 CMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPC 101
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.088e-21 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 L+ G VYRE+H SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ E+ K YP + RIIGF+ V+ ISF Sbjct: 105 LEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISF 174 HSP 2 Score: 68.9366 bits (167), Expect = 5.067e-11 Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWPP G K +ETLSYLPPL+ E L KE+ YLLR GW+PC Sbjct: 59 CMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPC 100
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.088e-21 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 431 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISFPCWPAPRR 664 L+ +VYRE++ SPGYYDGRYW MWKLPM+GCTDATQVL E+ E K YP S +RIIGF+ + V+ ISF + P + Sbjct: 105 LEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPPAK 182 HSP 2 Score: 71.2478 bits (173), Expect = 1.021e-11 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWPP GL+KFETLSYLPPLS E+L K+I YL+ GWIPC Sbjct: 59 CMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPC 100
BLAST of EY675056 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.421e-21 Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 419 WVA*LQ---KGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFEQQAPVEWISF 640 WV L+ +G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E +KEYP +F+R+IGF+ V+ +SF Sbjct: 97 WVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSF 173 HSP 2 Score: 70.8626 bits (172), Expect = 1.333e-11 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 27 CYMVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPC 152 C VWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PC Sbjct: 59 CMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPC 100 The following BLAST results are available for this feature:
BLAST of EY675056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675056 ID=EY675056; Name=EY675056; organism=Citrus sinensis; type=EST; length=992bpback to top |