EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPG (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadI PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.196e-36
Identity = 88/203 (43.35%), Postives = 124/203 (61.08%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D+ L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSILAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.205e-34
Identity = 83/213 (38.97%), Postives = 129/213 (60.56%), Query Frame = -1
Query:   33 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAGEFRR 653
            +++A       + +G I+ GIAGG+D++   PIG+++ L R L+ A++ +    KLK   G+RP     P+ P   E  TGL MG+  E+MAK   I R  QD L L SHQR   A++QG  +D      + P+ +   +DNN+RA++ ++  A L PA+DR++GT+TA NSTPLTDGA+ V+L + + A E G+  L +LR+   +A + R+
Sbjct:  102 SFQAVANVAESLMIGHIQAGIAGGADSSSVLPIGVSKKLARLLVDASKTRSLAQKLKLFSGLRPRDLL-PVAPAVAEYSTGLRMGDSAEQMAKNHGITREQQDALALRSHQRAAHAWQQGLLNDEVMTACVPPWEQPFEQDNNVRAESKMQDYARLRPAFDRRHGTVTAANSTPLTDGAAAVILMTASRARELGIAPLGFLRSYAFSAIDVRQ 313          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.981e-34
Identity = 88/211 (41.71%), Postives = 125/211 (59.24%), Query Frame = -1
Query:   48 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP---RNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 653
            +++AAV     I  G I++GIAGG+D++   PIG+++ L  +LL+ ++ K  G KLK L     ++ FK L+P      E  TGLSMG+  E+MAK + I R  QD L   SH     A+ +G   D +      PY+  L  DNN+R D+ LE  A L PA+DRQ G++TA NSTPLTDGA+ ++L  E  A E GL ++ Y+R+   AA
Sbjct:  101 SFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLS----NLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRSHTLAAQAWAEGKIRDEVMTAFPEPYKKWLDMDNNIRMDSKLESYAKLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAA 307          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadI PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.981e-34
Identity = 88/211 (41.71%), Postives = 125/211 (59.24%), Query Frame = -1
Query:   48 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP---RNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 653
            +++AAV     I  G I++GIAGG+D++   PIG+++ L  +LL+ ++ K  G KLK L     ++ FK L+P      E  TGLSMG+  E+MAK + I R  QD L   SH     A+ +G   D +      PY+  L  DNN+R D+ LE  A L PA+DRQ G++TA NSTPLTDGA+ ++L  E  A E GL ++ Y+R+   AA
Sbjct:  101 SFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLS----NLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRSHTLAAQAWTEGKIRDEVMTAFPEPYKKWLDMDNNIRMDSKLESYAKLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAA 307          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadI PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.020e-33
Identity = 82/203 (40.39%), Postives = 122/203 (60.10%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G + V IAGG+D++   PIG++++L RTL+  N+A+    +LK    ++      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG   D      I P+   +  DNN+R D+++E+ A L PA+DR++G++TA NSTPLTDGA+ V++ SE+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVTVAIAGGADSSSVLPIGVSKALARTLVDVNKARTLSQRLKLFSRLKLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISRQDQDALALRSHQMAAQAWQQGLLHDEVMTAYIPPFSDAITEDNNIRKDSTMEQYAKLRPAFDRKHGSVTAANSTPLTDGAAAVMMMSESKAKELGLQPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadI PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.332e-33
Identity = 84/192 (43.75%), Postives = 117/192 (60.94%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G I +GIAGG+D++   PIG++++L RTL+  N+A+    +LK    ++      P+ P   E  TGL MG+  E+MAK   I R  QD L   SHQ    A++QG   D      + PYR  ++ DNN+R D+SL   A L PA+DR++G++TA NSTPLTDGA+ VL+ SE+ A E GL  L YLR+
Sbjct:  113 IMAGSISIGIAGGADSSSVLPIGVSKALARTLVDVNKARTLSQRLKLFSRLK-FRDLMPVPPAVAEYSTGLRMGDTAEQMAKSHGITREEQDALAHRSHQLAAKAWEQGLLHDEVMTAYVPPYRTQISEDNNVRKDSSLASYAKLKPAFDRKHGSVTAANSTPLTDGAAAVLMMSESRAKELGLQPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.273e-33
Identity = 85/203 (41.87%), Postives = 120/203 (59.11%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+ TG KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   D +      PY+   + DNN+R +++L   A L PA+DRQ+GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARILVDVNKARTTGQKLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLADEVMTTYAPPYKEPFSEDNNIRGNSTLADYAKLRPAFDRQHGTVTAANSTPLTDGAAAVILMTESRAKELGLAPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadI PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.968e-33
Identity = 84/203 (41.38%), Postives = 121/203 (59.61%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L RTL+ AN+A+    KLK    +RP     P+ P   E  TGL MG+  E+MAK W I R  QD L   SHQ    A+++G     +      P+R  L +DNN+R +++L     L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKTLARTLVDANKARTLSQKLKLFSRLRPRDLL-PVPPAVAEYSTGLRMGDTAEQMAKSWGISREQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREPLEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_KLEP3 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (strain 342) GN=fadI PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.968e-33
Identity = 84/203 (41.38%), Postives = 121/203 (59.61%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L RTL+ AN+A+    KLK    +RP     P+ P   E  TGL MG+  E+MAK W I R  QD L   SHQ    A+++G     +      P+R  L +DNN+R +++L     L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKTLARTLVDANKARTLSQKLKLFSRLRPRDLL-PVPPAVAEYSTGLRMGDTAEQMAKSWGITREQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREPLEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLTPLGYLRS 303          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADI_YERP39.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPG2.196e-3643.353-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_ERWT91.205e-3438.973-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
FADI_VIBCH5.981e-3441.713-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI... [more]
FADI_VIBC35.981e-3441.713-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADI_YERE81.020e-3340.393-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADI_SERP51.332e-3343.753-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
FADI_CITK82.273e-3341.873-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
FADI_KLEP72.968e-3341.383-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADI_KLEP32.968e-3341.383-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
back to top