EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ECHB_HUMAN (Trifunctional enzyme subunit beta, mitochondrial OS=Homo sapiens GN=HADHB PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 5.611e-24
Identity = 72/199 (36.18%), Postives = 107/199 (53.77%), Query Frame = -1
Query:   66 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 647
            +A   G   IA GQ +V +AGG +   D PI  +  +R+ +L  N+AK  G +L  +   R + F  P LP   E  T  +MG   + +A  + + RL QDE  L SH     A  +G   D++ P++      + +DN +R  +SLE++A L PA+ +  GT+TA NS+ LTDGAS +L+ +E  A   G    AYLR
Sbjct:  143 QAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFN-FLAPELPAVSEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVV-PFKVPGKDTVTKDNGIRP-SSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLR 338          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ECHB_RAT (Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus GN=Hadhb PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.204e-23
Identity = 69/190 (36.32%), Postives = 105/190 (55.26%), Query Frame = -1
Query:   66 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 620
            IA GQ +V +AGG +   D PI  + ++R+ +L  N+AK    +L  L   R + F  P LP   E  T  +MG   + +A  + + R+ QD+  L SH     A  +G   D++ P++      +++DN +R  +SLE++A L PA+ +  GT+TA NS+ LTDGAS +L+ SE  A   G    AYLR
Sbjct:  153 IASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLAQRLSLLTKFRLN-FLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDKYALRSHSLAKKAQDEGHLSDIV-PFKVPGKDTVSKDNGIRP-SSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPKAYLR 339          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ECHB_BOVIN (Trifunctional enzyme subunit beta, mitochondrial OS=Bos taurus GN=HADHB PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.252e-22
Identity = 69/190 (36.32%), Postives = 102/190 (53.68%), Query Frame = -1
Query:   66 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 620
            IA GQ +V +AGG +   D PI  +  +R+ +L  N+AK    +L  +   R + F  P LP   E  T  +MG   + +A  + I R  QDE  L SH     A  +G   D++ P++      + +DN +R  +SL+++A L PA+ +  GT+TA NS+ LTDGAS VL+ +E  A   G    AYLR
Sbjct:  153 IASGQCDVVVAGGVELMSDIPIRHSRKMRKMMLDLNKAKTLAQRLSIISKFRLN-FLSPELPAVSEFSTSETMGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLSDVV-PFKVPGRDTVTQDNGIRP-SSLDQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPKAYLR 339          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.283e-17
Identity = 68/214 (31.78%), Postives = 103/214 (48.13%), Query Frame = -1
Query:   51 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNG--EPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISP-----YRGLARDNNLRADTS-----LEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR-TGETA 653
            A KA +LG   I  G  +V +AGG ++  +AP           + A RA     +   + GV           R+G  +   GL+MG H E+ A+ W I R  QD   + S+Q+   + K+G FD+ I P     +RG   D  +  D       +EKL      + ++NGT+TA N++P+ DGA+ V+L SE    E+ L  LA ++  GE A
Sbjct:   94 AMKAIILGAQSIKCGNADVVVAGGCESMTNAPY---------YMPAARAGAKFGQTVLVDGVE----------RDGLNDAYDGLAMGVHAEKCARDWDITREQQDNFAIESYQKSQKSQKEGKFDNEIVPVTIKGFRGKP-DTQVTKDEEPARLHVEKLRSARTVFQKENGTVTAANASPINDGAAAVILVSEKVLKEKNLKPLAIIKGWGEAA 287          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.895e-17
Identity = 67/209 (32.06%), Postives = 103/209 (49.28%), Query Frame = -1
Query:   51 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALM--GVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPY--------RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETA 647
            +A  LG  QIA G  +V +AGG ++   AP   +       L      G    +  ++  G+  + +             G  MG   E +A++WQ+ R  QDE  L S  + +AA K G F D I P+          + +D  +R   +L+ +A L PA+D++ GT+TAGN++ L DGA+  LL +EA AA RG+  LA + +  TA
Sbjct:   95 RAVALGMQQIATGDAKVIVAGGMESMSMAPHCAH-------LRGGVKMGDYKMIDTMIKDGLTDAFY-------------GYHMGITAENVARKWQLTREEQDEFALASQNKAEAAQKAGRFADEIVPFVVKTRKGDVNVDQDEYIRHGATLDSIAKLRPAFDKE-GTVTAGNASGLNDGAAAALLMTEAEAARRGIQPLARIVSWATA 282          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.087e-17
Identity = 66/213 (30.99%), Postives = 102/213 (47.89%), Query Frame = -1
Query:   51 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNG--EPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISP-----YRGL----ARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR-TGETA 653
            A KA +LG   I  G  +V +AGG ++  +AP           + A R      +   + GV           R+G  +   GL+MG H E+ A+ W I R  QD   + S+Q+   + K+G FD+ I P     +RG       ++   A   +EKL      + R+NGT+TA N++P+ DGA+ ++L SE    E+ L  LA ++  GE A
Sbjct:   94 AMKAIILGAQSIKCGNADVVVAGGCESMTNAPY---------YMPAARGGAKFGQTVLIDGVE----------RDGLNDAYDGLAMGVHAEKCARDWDITRDQQDSFAIESYQKSQQSQKEGKFDNEIVPVTIKGFRGKPDTQVTNDEEPARLHVEKLKSARTVFQRENGTVTAANASPINDGAAAIILVSERVLKEKNLKPLAIVKGWGEAA 287          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = -1
Query:   63 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 404
            MG   E + K   I R  QD   L SHQ+   A  +G+FD  I P  G         +  D  +R +T+LE LA L PA+D  NGT+TAG+S+ L+DGAS +L+ SE  A E GLP+ A +R+
Sbjct:  147 MGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPIEGHDENGVLTLVTHDEVIRPETTLEGLAALRPAFDPANGTVTAGSSSALSDGASAMLVMSEEKANELGLPIRAKVRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = -1
Query:   63 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 404
            MG   E + K   I R  QD   L SHQ+   A  +G+FD  I P  G         +  D  +R +T+LE LA L PA+D  NGT+TAG+S+ L+DGAS +L+ SE  A E GLP+ A +R+
Sbjct:  147 MGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPMEGHDENGALTLVTHDEVIRPETTLEGLAALRPAFDPANGTVTAGSSSALSDGASAMLVMSEEKANELGLPIRAKVRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.624e-16
Identity = 57/138 (41.30%), Postives = 74/138 (53.62%), Query Frame = -1
Query:   66 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLARDNNL---------RADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 452
            F P L R      G+ MG   E +A+   I R  QD+    SHQR   A + G F   I P  G   D  L         R DT+++ LA L PA+D  NGT+TAG+S+ L+DGAS +L+ SE+ AA  GLPV A +R
Sbjct:  132 FHPGLSRTIAKAAGM-MGLTAEMLARMHNISREMQDQFAARSHQRAYHATQSGAFRHEIVPTAGHDADGALQRFDYDEVIRPDTTIDSLAALKPAFDPVNGTVTAGSSSALSDGASAMLIMSESRAASLGLPVRARIR 268          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 7.346e-16
Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = -1
Query:   78 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALM--GVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLAR--------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVL 647
            +A  LG  QIA G   + +AGG ++   AP   +       L+     G    +  ++  G+  + +             G  MG   E +AK+WQ+ R  QD   + S  + +AA K G F D I P+    R        D  +R   +L+ +A L PA+D++ GT+TAGN++ L DGA+  LL SEA A+ RG+  L
Sbjct:   94 RAVALGMQQIATGDASIIVAGGMESMSMAPHCAH-------LAGGVKMGDFKMIDTMIKDGLTDAFY-------------GYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKE-GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPL 272          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
ECHB_HUMAN5.611e-2436.18Trifunctional enzyme subunit beta, mitochondrial O... [more]
ECHB_RAT6.204e-2336.32Trifunctional enzyme subunit beta, mitochondrial O... [more]
ECHB_BOVIN5.252e-2236.32Trifunctional enzyme subunit beta, mitochondrial O... [more]
THIL_YEAST2.283e-1731.78Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_RHIME3.895e-1732.06Acetyl-CoA acetyltransferase OS=Rhizobium meliloti... [more]
THIL_SACBA5.087e-1730.99Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
FADA_VIBFM8.677e-1742.283-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADA_VIBF18.677e-1742.283-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADA_ERWCT5.624e-1641.303-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
THIL_ZOORA7.346e-1631.50Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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