EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.173e-13
Identity = 65/177 (36.72%), Postives = 87/177 (49.15%), Query Frame = -1
Query:   66 SLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGL---------SMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLARDNNL---------RADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 542
            S  + L  A RA  TGA    L+G    M   P+   N +   GL         SMG   E +A    I R  QDE    SHQR  AA  +G F   I    G A D +L         R +T++E L+ L P ++  +GT+TAG S+ L+DGAS +L+ SEA A E GLP+ A ++
Sbjct:   93 SSMQALHDAARAIMTGAGDTYLIGGVEHMGHVPMTHGN-DFHPGLATSIAQAAGSMGLTAEYLATLHGISREQQDEFAYRSHQRAQAATVEGRFRREILAMEGHAADGSLILVEDDEVIRPETTVEGLSKLRPVFNPASGTVTAGTSSALSDGASAMLVMSEAKAKELGLPIRARIK 268          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE    SHQR  AA + G F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE    SHQR  AA + G F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE    SHQR  AA + G F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE    SHQR  AA + G F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE    SHQR  AA + G F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE    SHQR  AA + G F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.532e-13
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLAR---------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + ++     G+ MG   E + +   I R  QDE    SHQR  AA  +G F + I P  G            D  +R +T++E L+ L PA+D  NGT+TAG+S+ L+DGAS +L+ SE  A E GL + A +++
Sbjct:  132 FHPGMSKSVAKAAGM-MGLTAEMLGRMHGISRQMQDEFAARSHQRAHAATIEGRFKNEILPIEGHDENGILKLYDYDEVIRPETTVEGLSNLRPAFDPVNGTVTAGSSSALSDGASAMLVMSEHRAKELGLTIRARVKS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.000e-13
Identity = 63/204 (30.88%), Postives = 95/204 (46.57%), Query Frame = -1
Query:   63 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR---------GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 647
            KA +L  N I  G  E+ +AGG +    AP  +  S        +  +   AKL   M          ++    +      MG   E +AK + I R AQDE  + S  + +AA K G FD+ I P               D  +R   +L+ ++GL PA+D+  GT+TA N++ L DGA+ V++ S A A E GL  LA +++
Sbjct:   93 KAVMLAANAIMAGDAEIVVAGGQENMSAAPHVLPGS-------RDGFRMGDAKLVDTM----------IVDGLWDVYNQYHMGITAENVAKEYGITREAQDEFAVGSQNKAEAAQKAGKFDEEIVPVLIPQRKGDPVAFKTDEFVRQGATLDSMSGLKPAFDKA-GTVTAANASGLNDGAAAVVVMSAAKAKELGLTPLATIKS 278          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.000e-13
Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P L  N    +G+ MG   E + K   I R  QD+  + SHQR  AA  +G F + I    G         +  D  +R +T+LE LAGL P +D  NGT+TAG S+ L+DGA+ +L+  E  A   GL + A +R+
Sbjct:  132 FHPGLAANVAKASGM-MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANEIYAIEGHDANGALIKVDYDEVIRPETTLESLAGLRPVFDPANGTVTAGTSSALSDGAAAMLVMEEEKARALGLTIRARVRS 269          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADA_PSEHT1.173e-1336.723-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
FADA_YERPS1.532e-1340.293-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_YERPP1.532e-1340.293-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADA_YERPN1.532e-1340.293-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADA_YERPE1.532e-1340.293-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA... [more]
FADA_YERPA1.532e-1340.293-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADA_YERP31.532e-1340.293-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_PHOPR1.532e-1336.693-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
THIL_RALEH2.000e-1330.88Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]
FADA_SHEAM2.000e-1337.413-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
back to top