EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIL_MYCLE (Probable acetyl-CoA acetyltransferase OS=Mycobacterium leprae GN=fadA4 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11
Identity = 45/133 (33.83%), Postives = 66/133 (49.62%), Query Frame = -1
Query:   45 TGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR---------GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAG 416
            T   MG   E+     +  R  QDE    SHQ+  AA+K G F D + P               D  +RA+TS E LAGL PA+ R  GT+T G+++ ++DGA+ V++ ++  A + GL  L  +      AG
Sbjct:  153 TNQPMGALTEQRNDVEKFTRQEQDEFAARSHQKAAAAWKDGVFADEVVPVSIPQSKGDSLQFTEDEGIRANTSAESLAGLKPAF-RCGGTITPGSASQISDGAATVVVMNKEKAQQLGLTWLVEIGAHGVVAG 284          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_PSYWF (3-ketoacyl-CoA thiolase OS=Psychrobacter sp. (strain PRwf-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11
Identity = 47/123 (38.21%), Postives = 63/123 (51.22%), Query Frame = -1
Query:   63 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 404
            MG   E + +   I R  QDE    SH+R  AA + G FD+ I    G            D  +R DTS+E LA L P +D  NGT+TA  S+ L+DGAS +L+ S   A + GL   A +R+
Sbjct:  151 MGLTAEMLGRMNGITREQQDEFGYESHRRAWAATQAGRFDNEIIGIEGHDAEGRLQLCTVDEVIRPDTSMESLAKLRPVFDPANGTVTAATSSALSDGASAMLVMSAQKAKDLGLKPRARIRS 273          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.115e-11
Identity = 65/207 (31.40%), Postives = 96/207 (46.38%), Query Frame = -1
Query:   63 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVR--PSMFFKPLLPRNGE--PRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLAR--------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 647
            K+  L    I  GQ +  +AGG +         N SL   LL A          KA  G R      +  +L R+G      G  MG   E +AK + I R  QDEL L S ++  AA + G F   I P   + R        D   +A+++ E L  L PA+D+  GT+TAGN++ + DGA+ +++  E+ A   GL  LA +++
Sbjct:   93 KSVALAAQAIQAGQAQSIVAGGME---------NMSLAPYLLDA----------KARSGYRLGDGQVYDVIL-RDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKA-GTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKS 278          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.292e-11
Identity = 44/137 (32.12%), Postives = 72/137 (52.55%), Query Frame = -1
Query:   66 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISP--------YRGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 452
            F P + +     +G SMG   E + ++  I R  QD     SHQ+  AA  +G ++++++          + +  D  +R D++ E ++GL P +D  NGT+TAG S+ L+DGAS +L+ S   A   GL   A +R
Sbjct:  132 FHPGIAKTAARASG-SMGMTAELLGRQNGISREMQDAFGARSHQKAHAAAVEGRWNEIVATEGHDADGILKLIDADETIRPDSTTESMSGLRPVFDPVNGTVTAGTSSALSDGASAMLIMSADKAKALGLTPRAKIR 267          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
THIL_MYCLE7.115e-1133.83Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
FADA_PSYWF7.115e-1138.213-ketoacyl-CoA thiolase OS=Psychrobacter sp. (stra... [more]
ATOB_ECOLI7.115e-1131.40Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
FADA_PSEA69.292e-1132.123-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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