EY674967 | Citrus Genome Database

Overview


Name	EY674967
Unique Name	EY674967
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1046

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.286e-32
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.286e-32
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.286e-32
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECO81 (3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (strain ED1a) GN=fadI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.286e-32
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.286e-32
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECO27 (3-ketoacyl-CoA thiolase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.286e-32
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.312e-32
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLCDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.312e-32
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHIB3 (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.312e-32
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303

[Close]

BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.312e-32
Identity = 80/205 (39.02%), Postives = 120/205 (58.54%), Query Frame = -1

Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++AV     I  G IE+GIAGG+D++   PIG+++ L   L+  N+A+  G KL+    +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +      PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303

The following BLAST results are available for this feature:

BLAST of EY674967 vs. ExPASy Swiss-Prot

BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214


Match Name	E-value	Identity	Description
FADI_ECOUT	4.286e-32	40.89	3-ketoacyl-CoA thiolase OS=Escherichia coli (strai...	[more]
FADI_ECOL5	4.286e-32	40.89	3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15...	[more]
FADI_ECOK1	4.286e-32	40.89	3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 ...	[more]
FADI_ECO81	4.286e-32	40.89	3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (s...	[more]
FADI_ECO45	4.286e-32	40.89	3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1...	[more]
FADI_ECO27	4.286e-32	40.89	3-ketoacyl-CoA thiolase OS=Escherichia coli O127:H...	[more]
FADI_SHISS	7.312e-32	40.89	3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain...	[more]
FADI_SHIBS	7.312e-32	40.89	3-ketoacyl-CoA thiolase OS=Shigella boydii serotyp...	[more]
FADI_SHIB3	7.312e-32	40.89	3-ketoacyl-CoA thiolase OS=Shigella boydii serotyp...	[more]
FADI_SHEB9	7.312e-32	39.02	3-ketoacyl-CoA thiolase OS=Shewanella baltica (str...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA