EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.312e-32
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECO7I (3-ketoacyl-CoA thiolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 9.549e-32
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = -1
Query:   63 GQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 611
            G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  116 GTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.247e-31
Identity = 84/205 (40.98%), Postives = 121/205 (59.02%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++AA      I  G I++GIAGG+D++   PIG+++ L  TLL+ ++A+    +LK L  + V+  M   P+ P   E  TG+SMG+  E+MAK   I R  QD L   SH     A+K G     +      PY + + +DNN+R D++LE  A L PA+DR+ GT+TA NSTPLTDGA+ +LL  E  A E GL  L Y+R+
Sbjct:  102 SFQAAANVAESIISGTIDIGIAGGADSSSVLPIGVSKKLAATLLALSKARTMSKRLKLLSTLSVKDLM---PVPPAVAEYSTGISMGQTAEQMAKSHGITRQEQDALAYRSHTLAAKAWKDGLIRGEVMTAFPEPYGQWIDKDNNIREDSTLESYAKLRPAFDRKFGTVTAANSTPLTDGAAAILLMREGRAKELGLKPLGYIRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHESH (3-ketoacyl-CoA thiolase OS=Shewanella sediminis (strain HAW-EB3) GN=fadI PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.127e-31
Identity = 79/205 (38.54%), Postives = 120/205 (58.54%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G IE+GIAGG+D++   PIG+++ L   L+  N+A+  G KL  +  +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +      PY+  + RDNN+R ++++E  A L PA+DR++GT+TA  STPLTDGAS VLL SE+ A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNIEIGIAGGADSSSVVPIGVSKKLAHALIDLNKARSFGQKLAIIRRLGLKDLL---PVPPAVAEFSTGLSMGQTAEQMAKTYNISRADQDALAHRSHSLATETWNAGHLTDEVMAAHVPPYKSFIDRDNNIRENSTIESYAKLRPAFDRKHGTVTAATSTPLTDGASAVLLMSESRAKALGYDPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECOLC (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadI PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.127e-31
Identity = 82/203 (40.39%), Postives = 116/203 (57.14%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+     DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPFVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadI PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.778e-31
Identity = 82/203 (40.39%), Postives = 116/203 (57.14%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L   L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLAHVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadI PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.629e-31
Identity = 84/195 (43.08%), Postives = 115/195 (58.97%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRN---GEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G + +GIAGG+D++   PIG+ +SL RTL+  N+AK    +LK L  ++    F+ LLP +    E  TGL MG+  E+MAK ++I R  QD L   SH     A++QG   D +      PYR  L  DNN+R ++ L   A L PA+DR+ GT+TA NSTPLTDGA+ V+L  E+ A   G   L YLR+
Sbjct:  113 IMAGTVNIGIAGGADSSSVLPIGVTKSLARTLVEMNKAKTLSQRLKLLSRLK----FRDLLPVSPAVAEYSTGLRMGDTAEQMAKTYRISREDQDALAHRSHILAAKAWEQGLLVDEVMTAHFPPYREALLEDNNIRKNSVLTSYAKLRPAFDRKYGTVTAANSTPLTDGAAAVILMRESVAKALGTKPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadI PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.629e-31
Identity = 83/203 (40.89%), Postives = 117/203 (57.64%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDFNKARIMRQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadI PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.739e-31
Identity = 82/203 (40.39%), Postives = 116/203 (57.14%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L   L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLAYVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGATAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadI PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.739e-31
Identity = 81/203 (39.90%), Postives = 118/203 (58.13%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L R L+  N+A+ T  +L     +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLRT
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLFSRLRLRDLL-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRT 303          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADI_ECO247.312e-3240.893-ketoacyl-CoA thiolase OS=Escherichia coli O139:H... [more]
FADI_ECO7I9.549e-3243.393-ketoacyl-CoA thiolase OS=Escherichia coli O7:K1 ... [more]
FADI_PHOPR1.247e-3140.983-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
FADI_SHESH2.127e-3138.543-ketoacyl-CoA thiolase OS=Shewanella sediminis (s... [more]
FADI_ECOLC2.127e-3140.393-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_SHIF82.778e-3140.393-ketoacyl-CoA thiolase OS=Shigella flexneri serot... [more]
FADI_PHOLL3.629e-3143.083-ketoacyl-CoA thiolase OS=Photorhabdus luminescen... [more]
FADI_ECOHS3.629e-3140.893-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 ... [more]
FADI_SHIFL4.739e-3140.393-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fa... [more]
FADI_SALTY4.739e-3139.903-ketoacyl-CoA thiolase OS=Salmonella typhimurium ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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