EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadI PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.190e-31
Identity = 79/205 (38.54%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDL-----ISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G I++GIAGG+D++   PIG+++ L   L+  N+A+  G KL+    +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D      I PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNIDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHIPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadI PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.190e-31
Identity = 79/205 (38.54%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDL-----ISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G I++GIAGG+D++   PIG+++ L   L+  N+A+  G KL+    +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D      I PY+  + RDNN+R ++ LE  A L PA+D+Q+GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNIDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHIPPYKQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.084e-31
Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRGL-ARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG+++ L R L+  N+A+    +LK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   ++ +G   +      I PY+ L A DNN+  ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+   E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLM-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQSWSEGKLKEEVMTAFIPPYKQLLAEDNNICGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRTKELGLVPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.084e-31
Identity = 79/205 (38.54%), Postives = 120/205 (58.54%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G IE+GIAGG+D++   PIG+++ L   L+  N+A+  G K   +  +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +      PY+  + RDNN+R ++SL+  A L PA+DR++G++TA NSTPLTDGAS VLL SE+ A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKWAIIRRLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWDSGHLRDEVMVAHVPPYKSFIDRDNNIRENSSLDSYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSESRAKALGYEPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.056e-30
Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++AV     I  G IE+GIAGG+D++   PIG+++ L   L+  N+A+  G KL+    +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +      PY+  + RDNN+R ++ L   A L PA+D+++G++TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYKQFIERDNNIRENSDLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.056e-30
Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++AV     I  G IE+GIAGG+D++   PIG+++ L   L+  N+A+  G KL+    +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +      PY+  + RDNN+R ++ L   A L PA+D+++G++TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYKQFIERDNNIRENSDLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.056e-30
Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++AV     I  G IE+GIAGG+D++   PIG+++ L   L+  N+A+  G KL+    +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +      PY+  + RDNN+R ++ L   A L PA+D+++G++TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAHVPPYKQFIERDNNIRENSDLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SALSV (3-ketoacyl-CoA thiolase OS=Salmonella schwarzengrund (strain CVM19633) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.056e-30
Identity = 80/203 (39.41%), Postives = 118/203 (58.13%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L R L+  N+A+ T  +L     +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLFSRLRLRDLL-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SALPC (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi C (strain RKS4594) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.056e-30
Identity = 80/203 (39.41%), Postives = 118/203 (58.13%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L R L+  N+A+ T  +L     +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARALVDVNKARTTRQRLTLFSRLRLRDLL-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SALNS (3-ketoacyl-CoA thiolase OS=Salmonella newport (strain SL254) GN=fadI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.056e-30
Identity = 80/203 (39.41%), Postives = 118/203 (58.13%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L R L+  N+A+ T  +L     +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLFSRLRLRDLL-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRS 303          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADI_SHESW6.190e-3138.543-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHEPC6.190e-3138.543-ketoacyl-CoA thiolase OS=Shewanella putrefaciens... [more]
FADI_SHIDS8.084e-3139.903-ketoacyl-CoA thiolase OS=Shigella dysenteriae se... [more]
FADI_SHELP8.084e-3138.543-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADI_SHESR1.056e-3037.563-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHESM1.056e-3037.563-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHESA1.056e-3037.563-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SALSV1.056e-3039.413-ketoacyl-CoA thiolase OS=Salmonella schwarzengru... [more]
FADI_SALPC1.056e-3039.413-ketoacyl-CoA thiolase OS=Salmonella paratyphi C ... [more]
FADI_SALNS1.056e-3039.413-ketoacyl-CoA thiolase OS=Salmonella newport (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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