EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SALA4 (3-ketoacyl-CoA thiolase OS=Salmonella agona (strain SL483) GN=fadI PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.352e-30
Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L R L+  N+A+ T  +L     +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V++ +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLFSRLRLRDLL-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadI PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.072e-30
Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       +  G I  GIAGG+D++   PIG++++L R L+  N+A+ T  +L     +R      P+ P   E  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+     DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  102 SFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDVNKARTTRQRLTLFSRLRLRDLL-PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFTEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadI PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.072e-30
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQG-----FFDDLISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G +++ IAGG+D++   PIG+++ L R L+  N+A+    +   L  +R      P+ P   E  TGLSMG+  E+MAK  QI R AQD L   SH     A+  G      F   + PY+  L RDNN+R  + L   A L P +DR +GT+TA N+TPLTDGA+ VLL  E  A E GL  L Y+R+
Sbjct:  113 IMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRALRLKDLM-PVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKSPLERDNNIRESSDLASYAKLKPVFDRVHGTVTAANATPLTDGAAAVLLMREGRAKELGLEPLGYIRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEWM (3-ketoacyl-CoA thiolase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadI PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.012e-30
Identity = 78/205 (38.05%), Postives = 118/205 (57.56%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQG-----FFDDLISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G I++GIAGGSD++   PIG+++ L   L+  N+A+  G KL     +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G          + PY+  + RDNN+R ++S+E  A L PA+DR++GT+TA  STPLTDGAS +LL SE+ A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNIDIGIAGGSDSSSVLPIGVSKKLAHGLVDLNKARSFGQKLAIFRRLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHSLATETWNSGNLAQEVMTAHVPPYKAFIDRDNNIRENSSIESYAKLRPAFDRKHGTVTAATSTPLTDGASAILLMSESRAKALGYNPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadI PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.012e-30
Identity = 77/192 (40.10%), Postives = 112/192 (58.33%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G + VGIAGG+D++   PIG+++ L  +L+  N+A+  G +LK    +R      P+ P   E  TGLSMG+  E+MAK   I R  QD L   SH     A+  G   D +      PY+  +  DNN+R ++++E  A L P +DRQ+GT+TA N+TPLTDGA+ VL+ SE+ A   G  +L Y+R+
Sbjct:  113 IMAGSVTVGIAGGADSSSVLPIGVSKKLAGSLVDLNKARTLGQRLKIFSKLRLKDLL-PVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDALAHRSHSLATQAWADGKLKDEVMTAHLPPYKSFIEEDNNIRKNSTVEGYAKLKPVFDRQHGTVTAANATPLTDGAAAVLMMSESKAKALGYEILGYVRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.843e-30
Identity = 79/210 (37.62%), Postives = 121/210 (57.62%), Query Frame = -1
Query:   48 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 653
            ++++ V     I  G ++VGIAGG+D++  APIG+++ L RTL+   +A+  G +L  L  +G++  +   P+ P   E  TG+SMG+  E+MAK +QI R  QD L   SH     ++++G     +      PY+  + RDN  R ++ LE  A L P +DR++GT+TA  STPLTDG + +LL  E  A E G   L Y+R+   AA
Sbjct:  101 SFQSTVNVAESIMAGHVDVGIAGGADSSSVAPIGVSKKLARTLVDLTKARSLGQRLSLLSRLGLKDLL---PVSPAVAEYSTGISMGQTAEQMAKTYQISRQDQDALAHRSHTLATKSWQEGKLAGEVMTVHAEPYKSFIDRDNCFRENSVLESYAKLKPVFDRKHGTVTAATSTPLTDGGAAILLMREGRAKELGYKPLGYIRSFGFAA 307          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEHH (3-ketoacyl-CoA thiolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadI PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.938e-30
Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G +++GIAGG+D++   PIG+++ L   L+  N+A+  G KL     +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   + +      PY+  + RDNN+R +++LE  A L PA+DR++G++TA NSTPLTDGAS VLL SE  A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNMDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLAIFRRLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMAAHVPPYKSFIDRDNNIRENSTLESYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ALTMD (3-ketoacyl-CoA thiolase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=fadI PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.938e-30
Identity = 79/196 (40.31%), Postives = 115/196 (58.67%), Query Frame = -1
Query:   48 GQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 611
            G ++VGIAGG+D+T  +PIG++++L R L+   + K  G KL     + +R      P+ P   E  TGLSMG+  E+MAK  QI R  QD+L   SH     +++ G     +      PY+  L RDNN+R D+ LE  A L P +D++ G++TA N+TPLTDGAS VL+ +E+ A E G   L Y+++   AA
Sbjct:  116 GTVQVGIAGGADSTSVSPIGVSKNLARALVDLQKTKTLGQKLNIFKRLSLRD---LAPVPPAVAEYSTGLSMGQTAEQMAKTHQISREEQDKLAHRSHSLAAESWEAGKLSSEVMTAYAEPYKAALERDNNVRFDSKLEGYAKLRPVFDKKYGSVTAANATPLTDGASAVLMMTESRAKELGYTPLGYIKSYAFAA 308          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEPA (3-ketoacyl-CoA thiolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadI PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.167e-29
Identity = 76/205 (37.07%), Postives = 118/205 (57.56%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++ V     I  G +++GIAGG+D++   PIG+++ L   L+  N+A+  G +L     +G++  +   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   + +      PY+  + RDNN+R ++ LE  A L PA+DR++G++TA NSTPLTDGAS VLL SE  A   G   + Y+++
Sbjct:  102 SFQSTVNVAESIMTGNLDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSLGQRLSIFRRLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMVAHVPPYKAFIDRDNNIRENSKLESYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadI PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.167e-29
Identity = 79/205 (38.54%), Postives = 118/205 (57.56%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAK--LKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDL-----ISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++AV     I  G IE+G+AGGSD++   PIG+++ L   L+  N+A+    K  +   +G++  M   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   +      I PY+  + RDNN+R ++ LE  A L PA+DR++GT+TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSAVNVAESIMTGNIEIGLAGGSDSSSVLPIGVSKKLAHALVDLNKARTFKQKFAIARRLGLKDLM---PVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNSGHLRNEVMTAHIPPYKQFIDRDNNIRENSVLESYAKLRPAFDRKHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADI_SALA42.352e-3038.923-ketoacyl-CoA thiolase OS=Salmonella agona (strai... [more]
FADI_SALCH3.072e-3038.923-ketoacyl-CoA thiolase OS=Salmonella choleraesuis... [more]
FADI_AERS43.072e-3041.153-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
FADI_SHEWM4.012e-3038.053-ketoacyl-CoA thiolase OS=Shewanella woodyi (stra... [more]
FADI_PSEHT4.012e-3040.103-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
FADI_COLP36.843e-3037.623-ketoacyl-CoA thiolase OS=Colwellia psychrerythra... [more]
FADI_SHEHH8.938e-3037.563-ketoacyl-CoA thiolase OS=Shewanella halifaxensis... [more]
FADI_ALTMD8.938e-3040.313-ketoacyl-CoA thiolase OS=Alteromonas macleodii (... [more]
FADI_SHEPA1.167e-2937.073-ketoacyl-CoA thiolase OS=Shewanella pealeana (st... [more]
FADI_SHEFN1.167e-2938.543-ketoacyl-CoA thiolase OS=Shewanella frigidimarin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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