EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadI PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.167e-29
Identity = 79/210 (37.62%), Postives = 121/210 (57.62%), Query Frame = -1
Query:   48 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 653
            ++++ V     + LG I VGIAGG+D+T  +PIG++++L R L    + K  G K   L  +G++  +   P+ P   E  TGLSMG+  E+MAK   I R  QD+L   SH     ++ +G     +     +PY+    +DNN+R D+ LE  A L P +D+++GT+TA N+TPLTDGAS VL+ +E+ A   G   L Y+++   AA
Sbjct:  102 SFQSTVNIAESMMLGNISVGIAGGADSTSVSPIGVSKNLARALTDLQKTKTLGQKFNVLKKLGLKDLL---PVPPAVAEYSTGLSMGQTAEQMAKSHSISRADQDKLAHRSHSLAAQSWNEGKLAGEVMTAYPAPYKSAFEKDNNIRFDSKLEGYAKLRPVFDKKHGTVTAANATPLTDGASAVLMMTESRAKALGYTPLGYIKSYAFAA 308          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadI PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.167e-29
Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQG-----FFDDLISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G +++ IAGG+D++   PIG+++ L R L+  N+A+    +   L  +R      P+ P   E  TGLSMG+  E+MAK  QI R AQD L   SH     A+  G      F   + PY+  L RDNN+R  + L   A L P +DR +G++TA N+TPLTDGA+ VLL  E  A E GL  L Y+R+
Sbjct:  113 IMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRQLRVKDLL-PVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKAPLERDNNIRESSDLASYAKLKPVFDRVHGSVTAANATPLTDGAAAVLLMREGRARELGLEPLGYIRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadI PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.525e-29
Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            ++++AV     I  G +E+GIAGG+D++   PI +++ L   L+  N+A+  G K   +  +G++  M   P+ P   E  TGLSMG+  E+MAK + I R  QD L   SH      +  G   D +     +PY+  + RDNN+R ++ LE  A L PA+DR++G++TA NSTPLTDGAS ++L SE  A   G   + Y+++
Sbjct:  102 SFQSAVNVAESIMTGNVEIGIAGGADSSSVLPITVSKKLAHALVDLNKARTLGQKFAIMRRLGLKDLM---PVPPAVAEYSTGLSMGQTAEQMAKTYGISRADQDALAHRSHTLATETWNSGNLRDEVMTAHVAPYKQFIDRDNNIRENSVLESYAKLRPAFDRKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadI PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.291e-28
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G I++GIAGG+D++   PIG+++ L  TLL+ ++ K    KL +L+         P+ P   E  TG+SMG+  E+MAK   I R  QD L   SH     A+K G   D +      PY   L  DNN+R D+ L   A L PA+DR+ G++TA NSTPLTDG + +LL SE  A E G   L Y+R+
Sbjct:  119 IMAGTIDIGIAGGADSSSVLPIGVSKKLASTLLALSKTKTVYQKL-SLLRTLSLKDIAPVPPAVAEYSTGISMGQTAEQMAKSHGITREEQDALAHRSHTLAAKAWKDGLIQDEVMTAFPEPYTVWLDHDNNIRHDSELASYAKLRPAFDRKYGSVTAANSTPLTDGGAALLLMSEKRAKELGYEPLGYIRS 309          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadI PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.875e-28
Identity = 78/192 (40.62%), Postives = 107/192 (55.73%), Query Frame = -1
Query:   63 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 620
            I  G I++GIAGG+D++   PIG+++ L  TLL+ ++ K    KL +L+         P+ P   E  TG+SMG+  E+MAK   I R  QD L   SH     A+K G   D +      PY   L  DNN+R D+ L   A L PA+D + G++TA NSTPLTDG + +LL SE  A E G   L Y+R+
Sbjct:  119 IMAGTIDIGIAGGADSSSVLPIGVSKKLASTLLALSKTKTVYQKL-SLLRTLSLKDIAPVPPAVAEYSTGISMGQTAEQMAKSHGITREEQDALAHRSHTLAAKAWKDGLIQDEVMTAFPEPYTAWLDHDNNIRHDSDLASYAKLRPAFDHKYGSVTAANSTPLTDGGAALLLMSEKRAKELGYEPLGYIRS 309          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.208e-26
Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = -1
Query:   48 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKAL--MGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 653
            ++++ V     I  G IE+GIAGG+D++   PIG+++ L   L+   +A+  G KL     +G++  +   P+ P   E  TGLSMG+  E+MAK   I R  QD +   SH      +  G   + +      PY   + +DNN+R  + L   A L P +DR++G++TA NSTPLTDGAS +LL SE  A   G   + Y+++   AA
Sbjct:  102 SFQSTVNIAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLTKARTFGQKLAIFRRLGIKDLL---PVPPAVAEYSTGLSMGQTAEQMAKTHGISRADQDAMAHRSHTLAAQTWASGVMKNEVMVAHVPPYNQFIEKDNNIRESSDLASYAKLRPVFDRKHGSVTAANSTPLTDGASALLLMSEGRAKALGYTPIGYIKSYAFAA 308          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: YKA3_CAEEL (Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.519e-24
Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = -1
Query:   66 AAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPY------RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 644
            A   G   +A G     IAGG +   D PI  N + R+ +L  N+AK   +KLK + G        P LP   E  TG +MG   + +A  + + R  QDE  + SH     A K G F D++  +      + +  DN +R  T LEKL+ L PA+ + +GT+TA N++ LTDGAS  L+ +E +A   G    AYLR
Sbjct:  116 AMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLK-IGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTDVVPVFLDGKKPKTIKEDNGIRVST-LEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPKAYLR 312          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ECHB_MACFA (Trifunctional enzyme subunit beta, mitochondrial OS=Macaca fascicularis GN=HADHB PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.519e-24
Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = -1
Query:   66 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 647
            +A   G   IA GQ +V +AGG +   D PI  +  +R+ +L  N+AK  G +L  +   R + F  P LP   E  T  +MG   + +A  + + RL QDE  L SH     A  +G   D++ P+R      + +DN +R  +SLE++A L PA+ +  GT+TA NS+ LTDGAS +L+ +E  A   G    AYLR
Sbjct:  144 QAMTTGVGLIASGQCDVIVAGGVELMSDIPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRLN-FLAPELPAVAEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVV-PFRVPGKDTVTKDNGIRP-SSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLR 339          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ECHB_PANTR (Trifunctional enzyme subunit beta, mitochondrial OS=Pan troglodytes GN=HADHB PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.611e-24
Identity = 72/199 (36.18%), Postives = 107/199 (53.77%), Query Frame = -1
Query:   66 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 647
            +A   G   IA GQ +V +AGG +   D PI  +  +R+ +L  N+AK  G +L  +   R + F  P LP   E  T  +MG   + +A  + + RL QDE  L SH     A  +G   D++ P++      + +DN +R  +SLE++A L PA+ +  GT+TA NS+ LTDGAS +L+ +E  A   G    AYLR
Sbjct:  144 QAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFN-FLAPELPAVSEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVV-PFKVPGKDTVTKDNGIRP-SSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLR 339          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: ECHB_MOUSE (Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.611e-24
Identity = 71/190 (37.37%), Postives = 105/190 (55.26%), Query Frame = -1
Query:   66 IALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 620
            IA GQ +V +AGG +   D PI  + ++R+ +L  N+AK  G +L  L   R + F  P LP   E  T  +MG   + +A  + + R+ QDE  L SH     A  +G   D++ P++      + +DN +R  +SLE++A L PA+ +  GT+TA NS+ LTDGAS +L+ SE  A   G    AYLR
Sbjct:  153 IASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLGQRLSLLSKFRLN-FLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLSDIV-PFKVPGKDTVTKDNGIRP-SSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPKAYLR 339          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADI_PSEA61.167e-2937.623-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]
FADI_AERHH1.167e-2940.633-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
FADI_SHEDO1.525e-2937.563-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]
FADI_VIBFM1.291e-2841.153-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADI_VIBF12.875e-2840.633-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADI_SHEAM1.208e-2635.713-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
YKA3_CAEEL2.519e-2435.68Uncharacterized protein B0303.3 OS=Caenorhabditis ... [more]
ECHB_MACFA2.519e-2436.68Trifunctional enzyme subunit beta, mitochondrial O... [more]
ECHB_PANTR5.611e-2436.18Trifunctional enzyme subunit beta, mitochondrial O... [more]
ECHB_MOUSE5.611e-2437.37Trifunctional enzyme subunit beta, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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