EY674960

Overview
NameEY674960
Unique NameEY674960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_YERPG (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.503e-26
Identity = 65/130 (50.00%), Postives = 85/130 (65.38%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D+ L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSILAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          

HSP 2 Score: 25.409 bits (54), Expect = 3.503e-26
Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = -1
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            +++L RTL+ AN+A+    KLK    +R     + LLP
Sbjct:  137 SKALARTLVDANKARSLSQKLKLFSRLR----LRDLLP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadI PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.503e-26
Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QDEL   SH+    A++ G   D      + PY + L+ DNN+R D+++E+ + L PA+DR++GT+TA NSTPLTDGA+ VL+ SE+ A   GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREEQDELAHRSHKLAAQAWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSAIEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESKAKSLGLTPLGYLRS 303          

HSP 2 Score: 32.3426 bits (72), Expect = 3.503e-26
Identity = 17/38 (44.74%), Postives = 25/38 (65.79%), Query Frame = -1
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            +++L RTL+  N+A+  G KL+ L G+RP    K LLP
Sbjct:  137 SKALARTLVDMNKARTLGQKLRLLSGLRP----KDLLP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadI PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.859e-24
Identity = 61/130 (46.92%), Postives = 85/130 (65.38%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG   D      I P+   +  DNN+R D+++E+ A L PA+DR++G++TA NSTPLTDGA+ V++ SE+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGISRQDQDALALRSHQMAAQAWQQGLLHDEVMTAYIPPFSDAITEDNNIRKDSTMEQYAKLRPAFDRKHGSVTAANSTPLTDGAAAVMMMSESKAKELGLQPLGYLRS 303          

HSP 2 Score: 20.7866 bits (42), Expect = 8.859e-24
Identity = 8/22 (36.36%), Postives = 15/22 (68.18%), Query Frame = -1
Query:  445 NESLRRTLLSANRAKGTGAKLK 510
            +++L RTL+  N+A+    +LK
Sbjct:  137 SKALARTLVDVNKARTLSQRLK 158          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadI PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.153e-23
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK   I R  QD L   SHQ    A++QG   D      + PYR  ++ DNN+R D+SL   A L PA+DR++G++TA NSTPLTDGA+ VL+ SE+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKSHGITREEQDALAHRSHQLAAKAWEQGLLHDEVMTAYVPPYRTQISEDNNVRKDSSLASYAKLKPAFDRKHGSVTAANSTPLTDGAAAVLMMSESRAKELGLQPLGYLRS 303          

HSP 2 Score: 22.3274 bits (46), Expect = 1.153e-23
Identity = 11/38 (28.95%), Postives = 22/38 (57.89%), Query Frame = -1
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            +++L RTL+  N+A+    +LK    ++    F+ L+P
Sbjct:  137 SKALARTLVDVNKARTLSQRLKLFSRLK----FRDLMP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.952e-23
Identity = 61/130 (46.92%), Postives = 83/130 (63.85%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   D +      PY+   + DNN+R +++L   A L PA+DRQ+GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLADEVMTTYAPPYKEPFSEDNNIRGNSTLADYAKLRPAFDRQHGTVTAANSTPLTDGAAAVILMTESRAKELGLAPLGYLRS 303          

HSP 2 Score: 24.6386 bits (52), Expect = 1.952e-23
Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = -1
Query:  427 NESLRRTLLSANRAKGTGAKLKALMGVR 510
            ++ L R L+  N+A+ TG KLK    +R
Sbjct:  137 SKKLARILVDVNKARTTGQKLKLFSRLR 164          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.540e-23
Identity = 58/130 (44.62%), Postives = 85/130 (65.38%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK   I R  QD L L SHQR   A++QG  +D      + P+ +   +DNN+RA++ ++  A L PA+DR++GT+TA NSTPLTDGA+ V+L + + A E G+  L +LR+
Sbjct:  174 AVAEYSTGLRMGDSAEQMAKNHGITREQQDALALRSHQRAAHAWQQGLLNDEVMTACVPPWEQPFEQDNNVRAESKMQDYARLRPAFDRRHGTVTAANSTPLTDGAAAVILMTASRARELGIAPLGFLRS 303          

HSP 2 Score: 25.0238 bits (53), Expect = 2.540e-23
Identity = 13/38 (34.21%), Postives = 21/38 (55.26%), Query Frame = -1
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            ++ L R L+ A++ +    KLK   G+RP    + LLP
Sbjct:  137 SKKLARLLVDASKTRSLAQKLKLFSGLRP----RDLLP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.300e-23
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK W I R  QD L   SHQ    A+++G     +      P+R  L +DNN+R +++L     L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKSWGISREQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREPLEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          

HSP 2 Score: 27.335 bits (59), Expect = 4.300e-23
Identity = 15/38 (39.47%), Postives = 23/38 (60.53%), Query Frame = -1
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            +++L RTL+ AN+A+    KLK    +RP    + LLP
Sbjct:  137 SKTLARTLVDANKARTLSQKLKLFSRLRP----RDLLP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_KLEP3 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (strain 342) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.300e-23
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK W I R  QD L   SHQ    A+++G     +      P+R  L +DNN+R +++L     L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKSWGITREQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREPLEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLTPLGYLRS 303          

HSP 2 Score: 27.335 bits (59), Expect = 4.300e-23
Identity = 15/38 (39.47%), Postives = 23/38 (60.53%), Query Frame = -1
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            +++L RTL+ AN+A+    KLK    +RP    + LLP
Sbjct:  137 SKTLARTLVDANKARTLSQKLKLFSRLRP----RDLLP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECO5E (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.150e-23
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRGL-ARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+ L A DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAEDNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.150e-23
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRGL-ARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+ L A DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAEDNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303          
The following BLAST results are available for this feature:
BLAST of EY674960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
FADI_YERPG3.503e-2650.003-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_ERWCT3.503e-2646.153-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
FADI_YERE88.859e-2446.923-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADI_SERP51.153e-2348.463-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
FADI_CITK81.952e-2346.923-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
FADI_ERWT92.540e-2344.623-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
FADI_KLEP74.300e-2345.383-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADI_KLEP34.300e-2345.383-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (... [more]
FADI_ECO5E6.150e-2348.463-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
FADI_ECO576.150e-2348.463-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674960 ID=EY674960; Name=EY674960; organism=Citrus sinensis; type=EST; length=1041bp
AATTCACCGCTTGCGGTTTCACCGGTCCGCAAATAAGCCAAAACCGGCAA
GCCACGTTCGGCAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGC
CATCGGTCAGGGGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGG
TCGTAGGCCGGGGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCG
CAGGTTGTTGTCCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGA
AGAAACCCTGCTTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTC
AGTTCGTCCTGGGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTC
ACAGTGTTCACCCATGGACAGGCCAGTACGCGGTTTCGCCATTGCGCGGC
AGCAGCGGCTTGAAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAA
CTTGGCGCCGGTGCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCA
AGGACTCGTTGAAGCCCAAGGGGCCCGTCCGAGGTGGTGGTCGGAAACCG
CCCGGAATGCCCCCCTTTCATCTGCCCCAAGGCCATCTTGTTTCGCCCCC
AGCCACCCCGCCTTTCCCGGCCCGTGGCCGCAAGGTTTGTTTGCAGTCCT
AGGGCCGGGGGGTTTCGGGGAAAAAGCGGGGGGGGAAACCAGGCTTCCCC
CCCGGGGCCAGTTTGAATTCCCCCGGGAAATGTTTGTTCTCCCACCCCGG
GGGGAAAAATCCCCCCAGAGCCCAAGGCTCGGTGAAGGGGTGGAAGAGAG
ACCCACCCGGACCTTGGTAAGGGGTGCAAAACGAAAAAAAAACCAAGGTT
ATGAGTCCAGGAGGGCAAAAAAACAATCTATTAAGGGGGAAGGGCGAAAA
TATGGAAGGGAGGGGTACTCCTATGCCGAAATTATATCCAACCCTTATAA
GGGTGAGTTGGAAGATAGTGACCAACGGGGATGGAGAAAAACTAGATTTT
TTTTCCCGACTCTTTTCTGTATCCTTTGGTGAATTCGACTT
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