EY674960

Overview
NameEY674960
Unique NameEY674960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.535e-13
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = -2
Query:   24 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 365
            MG   E + K   I R  QD   + SHQR  AA  +G F   I    G         + +D  +R +T++E LA L P +D  NGT+TAG S+ L+DGAS +L+  E+ A   GLP+ A +R+
Sbjct:  147 MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRS 269          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.842e-13
Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -2
Query:   24 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLAR---------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 365
            MG   E + K   I R  QD   L SHQ    A  +G F D I P +G            D  +R DT+LE LA L PA++ + GT+TAG S+ +TDGAS +++ S   A + G+  +A +R+
Sbjct:  151 MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLKVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRS 273          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.842e-13
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -2
Query:   24 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 365
            MG   E +AK   I R  QDE    SH+    A ++G F + I P  G         +  D  +R +T+ E L  L PA+D +NGT+TAG S+ LTDGAS ++L S   A   GL  +A +R+
Sbjct:  151 MGLTAEMLAKMHGITREQQDEFGARSHRLAHEATQEGRFKNEIVPIEGHDENGFVKLIEEDETIRPETTAESLGQLRPAFDPKNGTVTAGTSSQLTDGASAMVLMSAERAEALGLTPIAKIRS 273          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.285e-12
Identity = 45/126 (35.71%), Postives = 77/126 (61.11%), Query Frame = -2
Query:   12 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISP--YRG------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETA 365
            MG   E +A++W I R  QDEL L S  + + A  +G FD+ I P   +G      + +D  ++  T++EKLA L PA+ +++GT+TAGN++ + DGA+++++ ++  A E G+  LA + +  TA
Sbjct:  157 MGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAF-KKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTA 281          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.285e-12
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = -2
Query:   24 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 365
            MG   E + K   I R  QD+  + SHQR  AA  +G F + I    G         +  D  +R +T+LE LAGL P +D  NGT+TAG S+ L+DGA+ +L+  E  A   GL + A +R+
Sbjct:  147 MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANEIYAIEGHDANGALIKVDYDEVIRPETTLESLAGLRPVFDPANGTVTAGTSSALSDGAAAMLVMEEEKARALGLTIRARVRS 269          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.285e-12
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = -2
Query:   24 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPY-----RG---LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 365
            MG   E +A+++ I R AQDEL L S      A + G FD  I P      +G   ++RD   +ADT+ E LA L PA+ ++ GT+TAGN++ + DGA+ ++L SE+ A   GL  +A +R+
Sbjct:  158 MGITAENIAEQYGISRQAQDELALRSQTLASQAVQLGVFDKEIVPVMVKTRKGDIIVSRDEYPKADTTAEGLAKLKPAFKKE-GTVTAGNASGINDGAAALILVSESKAHALGLKAIAKIRS 278          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = -2
Query:   24 LSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPY-------RGLAR------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 371
            + MG   E +A+R+ I R  QD   L S Q+   A  +G F   I P        +G  R      D  +R  T++E LA L PA+ +++G+ TAGNS+ ++DGA+ +LLA  + A E GLP+L  LR+
Sbjct:  179 IPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAF-KKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRS 306          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = -2
Query:   12 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETA 365
            MG   E +AK   I R  QDE    SH+    A  +G F + I   +G         +  D  +R +T+ E LA L PA+D ++GT+TAG S+ LTDGAS +LL S   A   GL  +A +R+  TA
Sbjct:  151 MGLTAEMLAKMHGISRQQQDEFGARSHRLAHEATLEGRFRNEIISIQGHDDDGFPALIENDETIRPETTAESLAQLRPAFDPKSGTVTAGQSSQLTDGASAMLLMSAERAQALGLTPMAKIRSMATA 277          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: ECHB_BOVIN (Trifunctional enzyme subunit beta, mitochondrial OS=Bos taurus GN=HADHB PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = -2
Query:   27 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYR-----GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 395
            A+++  T  +MG   + +A  + I R  QDE  L SH     A  +G   D++ P++      + +DN +R  +SL+++A L PA+ +  GT+TA NS+ LTDGAS VL+ +E  A   G    AYLR
Sbjct:  214 AVSEFSTSETMGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLSDVV-PFKVPGRDTVTQDNGIRP-SSLDQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPKAYLR 339          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.192e-12
Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = -2
Query:   24 LSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG-------------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 371
            + MG   E +A+R+ I R  QD   L S Q+  +A  +G F   I P                +++D  +R  T++E LA L PA+ +  G+ TAGNS+ ++DGA+ VLLA  + A E GLP+L  LR+
Sbjct:  179 IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDEGVRPSTTMEGLAKLKPAF-KDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRS 306          
The following BLAST results are available for this feature:
BLAST of EY674960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
FADA_SHEB57.535e-1338.213-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADA_PSEU29.842e-1337.403-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_MARAV9.842e-1338.213-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
THLA_CLOD61.285e-1235.71Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
FADA_SHEAM1.285e-1238.213-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
ATOB_HAEIN1.285e-1239.34Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
THIK_HUMAN1.679e-1237.213-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
FADA_HAHCH1.679e-1238.583-ketoacyl-CoA thiolase OS=Hahella chejuensis (str... [more]
ECHB_BOVIN1.679e-1236.72Trifunctional enzyme subunit beta, mitochondrial O... [more]
THIKB_RAT2.192e-1236.433-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674960 ID=EY674960; Name=EY674960; organism=Citrus sinensis; type=EST; length=1041bp
AATTCACCGCTTGCGGTTTCACCGGTCCGCAAATAAGCCAAAACCGGCAA
GCCACGTTCGGCAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGC
CATCGGTCAGGGGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGG
TCGTAGGCCGGGGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCG
CAGGTTGTTGTCCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGA
AGAAACCCTGCTTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTC
AGTTCGTCCTGGGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTC
ACAGTGTTCACCCATGGACAGGCCAGTACGCGGTTTCGCCATTGCGCGGC
AGCAGCGGCTTGAAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAA
CTTGGCGCCGGTGCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCA
AGGACTCGTTGAAGCCCAAGGGGCCCGTCCGAGGTGGTGGTCGGAAACCG
CCCGGAATGCCCCCCTTTCATCTGCCCCAAGGCCATCTTGTTTCGCCCCC
AGCCACCCCGCCTTTCCCGGCCCGTGGCCGCAAGGTTTGTTTGCAGTCCT
AGGGCCGGGGGGTTTCGGGGAAAAAGCGGGGGGGGAAACCAGGCTTCCCC
CCCGGGGCCAGTTTGAATTCCCCCGGGAAATGTTTGTTCTCCCACCCCGG
GGGGAAAAATCCCCCCAGAGCCCAAGGCTCGGTGAAGGGGTGGAAGAGAG
ACCCACCCGGACCTTGGTAAGGGGTGCAAAACGAAAAAAAAACCAAGGTT
ATGAGTCCAGGAGGGCAAAAAAACAATCTATTAAGGGGGAAGGGCGAAAA
TATGGAAGGGAGGGGTACTCCTATGCCGAAATTATATCCAACCCTTATAA
GGGTGAGTTGGAAGATAGTGACCAACGGGGATGGAGAAAAACTAGATTTT
TTTTCCCGACTCTTTTCTGTATCCTTTGGTGAATTCGACTT
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