EY674960

Overview
NameEY674960
Unique NameEY674960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOLU (3-ketoacyl-CoA thiolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.032e-23
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  LA DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLAEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadI PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.032e-23
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  LA DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLAEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECO81 (3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (strain ED1a) GN=fadI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECO27 (3-ketoacyl-CoA thiolase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOSM (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.789e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  LA DNN+R +++L   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLAEDNNIRGNSTLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadI PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.086e-22
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK   I R  QD L   SHQ    A+ +G   + +      PYR  L+ DNN+R  +SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTHGITREQQDALAHRSHQLAAQAWAEGKLREEVMTAYTPPYREPLSEDNNIRKTSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRARELGLTPLGYLRS 303

HSP 2 Score: 25.7942 bits (55), Expect = 2.086e-22
Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = -1 
Query:  397 NESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 510
            ++ L RTL+ AN+A+  G +LK    +R     + LLP
Sbjct:  137 SKKLARTLVDANKARTAGQRLKLFSRLR----LRDLLP 170
The following BLAST results are available for this feature:
BLAST of EY674960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
FADI_ECOLU8.032e-2348.463-ketoacyl-CoA thiolase OS=Escherichia coli O17:K5... [more]
FADI_ECOL68.032e-2348.463-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=... [more]
FADI_ECOUT1.370e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOL51.370e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15... [more]
FADI_ECOK11.370e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 ... [more]
FADI_ECO811.370e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli O81 (s... [more]
FADI_ECO451.370e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1... [more]
FADI_ECO271.370e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli O127:H... [more]
FADI_ECOSM1.789e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ENTS82.086e-2246.923-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674960 ID=EY674960; Name=EY674960; organism=Citrus sinensis; type=EST; length=1041bp
AATTCACCGCTTGCGGTTTCACCGGTCCGCAAATAAGCCAAAACCGGCAA
GCCACGTTCGGCAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGC
CATCGGTCAGGGGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGG
TCGTAGGCCGGGGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCG
CAGGTTGTTGTCCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGA
AGAAACCCTGCTTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTC
AGTTCGTCCTGGGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTC
ACAGTGTTCACCCATGGACAGGCCAGTACGCGGTTTCGCCATTGCGCGGC
AGCAGCGGCTTGAAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAA
CTTGGCGCCGGTGCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCA
AGGACTCGTTGAAGCCCAAGGGGCCCGTCCGAGGTGGTGGTCGGAAACCG
CCCGGAATGCCCCCCTTTCATCTGCCCCAAGGCCATCTTGTTTCGCCCCC
AGCCACCCCGCCTTTCCCGGCCCGTGGCCGCAAGGTTTGTTTGCAGTCCT
AGGGCCGGGGGGTTTCGGGGAAAAAGCGGGGGGGGAAACCAGGCTTCCCC
CCCGGGGCCAGTTTGAATTCCCCCGGGAAATGTTTGTTCTCCCACCCCGG
GGGGAAAAATCCCCCCAGAGCCCAAGGCTCGGTGAAGGGGTGGAAGAGAG
ACCCACCCGGACCTTGGTAAGGGGTGCAAAACGAAAAAAAAACCAAGGTT
ATGAGTCCAGGAGGGCAAAAAAACAATCTATTAAGGGGGAAGGGCGAAAA
TATGGAAGGGAGGGGTACTCCTATGCCGAAATTATATCCAACCCTTATAA
GGGTGAGTTGGAAGATAGTGACCAACGGGGATGGAGAAAAACTAGATTTT
TTTTCCCGACTCTTTTCTGTATCCTTTGGTGAATTCGACTT
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