EY674960

Overview
NameEY674960
Unique NameEY674960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGATAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SHIB3 (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   D      I P+R  L+ DNN+R  ++L   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAALAWSEGKLGDEVMTVYIPPFREPLSEDNNIRGTSTLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOSE (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain SE11) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadI PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
[Close]
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_ECODH (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / DH10B) GN=fadI PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.337e-22
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -2 
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+  G   +      I PY+  L  DNN+R ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRS 303
The following BLAST results are available for this feature:
BLAST of EY674960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
FADI_SHISS2.337e-2247.693-ketoacyl-CoA thiolase OS=Shigella sonnei (strain... [more]
FADI_SHIFL2.337e-2247.693-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fa... [more]
FADI_SHIF82.337e-2247.693-ketoacyl-CoA thiolase OS=Shigella flexneri serot... [more]
FADI_SHIBS2.337e-2247.693-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADI_SHIB32.337e-2247.693-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADI_ENT382.337e-2247.693-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
FADI_ECOSE2.337e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOLI2.337e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOHS2.337e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 ... [more]
FADI_ECODH2.337e-2247.693-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674960 ID=EY674960; Name=EY674960; organism=Citrus sinensis; type=EST; length=1041bp
AATTCACCGCTTGCGGTTTCACCGGTCCGCAAATAAGCCAAAACCGGCAA
GCCACGTTCGGCAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGC
CATCGGTCAGGGGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGG
TCGTAGGCCGGGGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCG
CAGGTTGTTGTCCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGA
AGAAACCCTGCTTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTC
AGTTCGTCCTGGGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTC
ACAGTGTTCACCCATGGACAGGCCAGTACGCGGTTTCGCCATTGCGCGGC
AGCAGCGGCTTGAAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAA
CTTGGCGCCGGTGCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCA
AGGACTCGTTGAAGCCCAAGGGGCCCGTCCGAGGTGGTGGTCGGAAACCG
CCCGGAATGCCCCCCTTTCATCTGCCCCAAGGCCATCTTGTTTCGCCCCC
AGCCACCCCGCCTTTCCCGGCCCGTGGCCGCAAGGTTTGTTTGCAGTCCT
AGGGCCGGGGGGTTTCGGGGAAAAAGCGGGGGGGGAAACCAGGCTTCCCC
CCCGGGGCCAGTTTGAATTCCCCCGGGAAATGTTTGTTCTCCCACCCCGG
GGGGAAAAATCCCCCCAGAGCCCAAGGCTCGGTGAAGGGGTGGAAGAGAG
ACCCACCCGGACCTTGGTAAGGGGTGCAAAACGAAAAAAAAACCAAGGTT
ATGAGTCCAGGAGGGCAAAAAAACAATCTATTAAGGGGGAAGGGCGAAAA
TATGGAAGGGAGGGGTACTCCTATGCCGAAATTATATCCAACCCTTATAA
GGGTGAGTTGGAAGATAGTGACCAACGGGGATGGAGAAAAACTAGATTTT
TTTTCCCGACTCTTTTCTGTATCCTTTGGTGAATTCGACTT
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