EY674960

Overview
NameEY674960
Unique NameEY674960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadI PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.712e-21
Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK ++I R  QD L   SH     A++QG   D +      PYR  L  DNN+R ++ L   A L PA+DR+ GT+TA NSTPLTDGA+ V+L  E+ A   G   L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYRISREDQDALAHRSHILAAKAWEQGLLVDEVMTAHFPPYREALLEDNNIRKNSVLTSYAKLRPAFDRKYGTVTAANSTPLTDGAAAVILMRESVAKALGTKPLGYLRS 303          

HSP 2 Score: 26.1794 bits (56), Expect = 1.712e-21
Identity = 15/37 (40.54%), Postives = 22/37 (59.46%), Query Frame = -1
Query:  397 ESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP 507
            +SL RTL+  N+AK    +LK L  ++    F+ LLP
Sbjct:  138 KSLARTLVEMNKAKTLSQRLKLLSRLK----FRDLLP 170          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = -2
Query:   27 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 395
            A+A+  TGLSMG+  E+MAK   I R  QD L   SH     A++ G     +      PY+  +A DNN+R D++LE  A L PA+DRQ G++TA NSTPLTDGA+ VLL  E  A E G+ +L Y+R
Sbjct:  173 AVAEYSTGLSMGQTAEQMAKTHGITRAEQDALAHRSHTLASQAWRDGKIAGEVMTAFPEPYKKWIAEDNNIRHDSTLEGYAKLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIR 301          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = -2
Query:   27 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 395
            A+A+  TGLSMG+  E+MAK   I R  QD L   SH     A++ G     +      PY+  +A DNN+R D++LE  A L PA+DRQ G++TA NSTPLTDGA+ VLL  E  A E G+ +L Y+R
Sbjct:  173 AVAEYSTGLSMGQTAEQMAKTHGITRAEQDALAHRSHTLASQAWRDGKIAGEVMTAFPEPYKKWIAEDNNIRHDSTLEGYAKLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIR 301          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRGL-ARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   ++ +G   +      I PY+ L A DNN+  ++SL   A L PA+DR++GT+TA NSTPLTDGA+ V+L +E+   E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQSWSEGKLKEEVMTAFIPPYKQLLAEDNNICGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRTKELGLVPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALSV (3-ketoacyl-CoA thiolase OS=Salmonella schwarzengrund (strain CVM19633) GN=fadI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALPC (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi C (strain RKS4594) GN=fadI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALNS (3-ketoacyl-CoA thiolase OS=Salmonella newport (strain SL254) GN=fadI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.375e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALPK (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A (strain AKU_12601) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.375e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.375e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRS 303          
The following BLAST results are available for this feature:
BLAST of EY674960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
FADI_PHOLL1.712e-2145.383-ketoacyl-CoA thiolase OS=Photorhabdus luminescen... [more]
FADI_VIBVY2.584e-2146.513-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADI_VIBVU2.584e-2146.513-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]
FADI_SHIDS2.584e-2146.153-ketoacyl-CoA thiolase OS=Shigella dysenteriae se... [more]
FADI_SALSV2.584e-2145.383-ketoacyl-CoA thiolase OS=Salmonella schwarzengru... [more]
FADI_SALPC2.584e-2145.383-ketoacyl-CoA thiolase OS=Salmonella paratyphi C ... [more]
FADI_SALNS2.584e-2145.383-ketoacyl-CoA thiolase OS=Salmonella newport (str... [more]
FADI_SALTI3.375e-2145.383-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fad... [more]
FADI_SALPK3.375e-2145.383-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADI_SALPA3.375e-2145.383-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674960 ID=EY674960; Name=EY674960; organism=Citrus sinensis; type=EST; length=1041bp
AATTCACCGCTTGCGGTTTCACCGGTCCGCAAATAAGCCAAAACCGGCAA
GCCACGTTCGGCAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGC
CATCGGTCAGGGGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGG
TCGTAGGCCGGGGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCG
CAGGTTGTTGTCCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGA
AGAAACCCTGCTTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTC
AGTTCGTCCTGGGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTC
ACAGTGTTCACCCATGGACAGGCCAGTACGCGGTTTCGCCATTGCGCGGC
AGCAGCGGCTTGAAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAA
CTTGGCGCCGGTGCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCA
AGGACTCGTTGAAGCCCAAGGGGCCCGTCCGAGGTGGTGGTCGGAAACCG
CCCGGAATGCCCCCCTTTCATCTGCCCCAAGGCCATCTTGTTTCGCCCCC
AGCCACCCCGCCTTTCCCGGCCCGTGGCCGCAAGGTTTGTTTGCAGTCCT
AGGGCCGGGGGGTTTCGGGGAAAAAGCGGGGGGGGAAACCAGGCTTCCCC
CCCGGGGCCAGTTTGAATTCCCCCGGGAAATGTTTGTTCTCCCACCCCGG
GGGGAAAAATCCCCCCAGAGCCCAAGGCTCGGTGAAGGGGTGGAAGAGAG
ACCCACCCGGACCTTGGTAAGGGGTGCAAAACGAAAAAAAAACCAAGGTT
ATGAGTCCAGGAGGGCAAAAAAACAATCTATTAAGGGGGAAGGGCGAAAA
TATGGAAGGGAGGGGTACTCCTATGCCGAAATTATATCCAACCCTTATAA
GGGTGAGTTGGAAGATAGTGACCAACGGGGATGGAGAAAAACTAGATTTT
TTTTCCCGACTCTTTTCTGTATCCTTTGGTGAATTCGACTT
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