EY674960

Overview
NameEY674960
Unique NameEY674960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALHS (3-ketoacyl-CoA thiolase OS=Salmonella heidelberg (strain SL476) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.375e-21
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALAR (3-ketoacyl-CoA thiolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.375e-21
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLIS-----PYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   + +      PY+   + DNN+R +++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAYRSHQRAAQAWAEGKLAEEVMTTYAPPYKNPFSEDNNIRGNSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.375e-21
Identity = 61/130 (46.92%), Postives = 77/130 (59.23%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQG-----FFDDLISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGLSMG+  E+MAK  QI R AQD L   SH     A+  G      F   + PY+  L RDNN+R  + L   A L P +DR +GT+TA N+TPLTDGA+ VLL  E  A E GL  L Y+R+
Sbjct:  174 AVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKSPLERDNNIRESSDLASYAKLKPVFDRVHGTVTAANATPLTDGAAAVLLMREGRAKELGLEPLGYIRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadI PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.407e-21
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = -2
Query:   27 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 395
            A+A+  TGLSMG+  E+MAK   I R  QD L   SH     A+K+G     +      PY+  ++ DNN+R D++LE  A L PA+DRQ G++TA NSTPLTDG + V+L  E  A E G+ +L Y+R
Sbjct:  173 AVAEYSTGLSMGQTAEQMAKTHGISRAEQDALAHRSHTLASQAWKEGKIQGEVMTAFPEPYKKWISEDNNVRHDSTLEGYAKLRPAFDRQYGSVTAANSTPLTDGGAAVMLMREGKAKELGMEILGYIR 301          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALPB (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.756e-21
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V++ +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALEP (3-ketoacyl-CoA thiolase OS=Salmonella enteritidis PT4 (strain P125109) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.756e-21
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V++ +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALDC (3-ketoacyl-CoA thiolase OS=Salmonella dublin (strain CT_02021853) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.756e-21
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V++ +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALA4 (3-ketoacyl-CoA thiolase OS=Salmonella agona (strain SL483) GN=fadI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.756e-21
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+   A DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V++ +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.756e-21
Identity = 59/130 (45.38%), Postives = 79/130 (60.77%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TG+SMG+  E+MAK   I R  QD L   SH     A+K G     +      PY + + +DNN+R D++LE  A L PA+DR+ GT+TA NSTPLTDGA+ +LL  E  A E GL  L Y+R+
Sbjct:  174 AVAEYSTGISMGQTAEQMAKSHGITRQEQDALAYRSHTLAAKAWKDGLIRGEVMTAFPEPYGQWIDKDNNIREDSTLESYAKLRPAFDRKFGTVTAANSTPLTDGAAAILLMREGRAKELGLKPLGYIRS 303          
BLAST of EY674960 vs. ExPASy Swiss-Prot
Match: FADI_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadI PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.518e-21
Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = -2
Query:   24 AMAKPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 395
            A+A+  TGL MG+  E+MAK + I R  QD L   SHQR   A+ +G   +      + PY+     DNN+R  ++L   A L PA+DR++G++TA NSTPLTDGA+ V+L +E+ A E GL  L YLR+
Sbjct:  174 AVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFTEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRS 303          
The following BLAST results are available for this feature:
BLAST of EY674960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
FADI_SALHS3.375e-2145.383-ketoacyl-CoA thiolase OS=Salmonella heidelberg (... [more]
FADI_SALAR3.375e-2144.623-ketoacyl-CoA thiolase OS=Salmonella arizonae (st... [more]
FADI_AERS43.375e-2146.923-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
FADI_VIBPA4.407e-2144.963-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]
FADI_SALPB5.756e-2144.623-ketoacyl-CoA thiolase OS=Salmonella paratyphi B ... [more]
FADI_SALEP5.756e-2144.623-ketoacyl-CoA thiolase OS=Salmonella enteritidis ... [more]
FADI_SALDC5.756e-2144.623-ketoacyl-CoA thiolase OS=Salmonella dublin (stra... [more]
FADI_SALA45.756e-2144.623-ketoacyl-CoA thiolase OS=Salmonella agona (strai... [more]
FADI_PHOPR5.756e-2145.383-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
FADI_SALCH7.518e-2144.623-ketoacyl-CoA thiolase OS=Salmonella choleraesuis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674960 ID=EY674960; Name=EY674960; organism=Citrus sinensis; type=EST; length=1041bp
AATTCACCGCTTGCGGTTTCACCGGTCCGCAAATAAGCCAAAACCGGCAA
GCCACGTTCGGCAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGC
CATCGGTCAGGGGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGG
TCGTAGGCCGGGGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCG
CAGGTTGTTGTCCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGA
AGAAACCCTGCTTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTC
AGTTCGTCCTGGGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTC
ACAGTGTTCACCCATGGACAGGCCAGTACGCGGTTTCGCCATTGCGCGGC
AGCAGCGGCTTGAAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAA
CTTGGCGCCGGTGCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCA
AGGACTCGTTGAAGCCCAAGGGGCCCGTCCGAGGTGGTGGTCGGAAACCG
CCCGGAATGCCCCCCTTTCATCTGCCCCAAGGCCATCTTGTTTCGCCCCC
AGCCACCCCGCCTTTCCCGGCCCGTGGCCGCAAGGTTTGTTTGCAGTCCT
AGGGCCGGGGGGTTTCGGGGAAAAAGCGGGGGGGGAAACCAGGCTTCCCC
CCCGGGGCCAGTTTGAATTCCCCCGGGAAATGTTTGTTCTCCCACCCCGG
GGGGAAAAATCCCCCCAGAGCCCAAGGCTCGGTGAAGGGGTGGAAGAGAG
ACCCACCCGGACCTTGGTAAGGGGTGCAAAACGAAAAAAAAACCAAGGTT
ATGAGTCCAGGAGGGCAAAAAAACAATCTATTAAGGGGGAAGGGCGAAAA
TATGGAAGGGAGGGGTACTCCTATGCCGAAATTATATCCAACCCTTATAA
GGGTGAGTTGGAAGATAGTGACCAACGGGGATGGAGAAAAACTAGATTTT
TTTTCCCGACTCTTTTCTGTATCCTTTGGTGAATTCGACTT
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