EY674957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_ATEGE (Cystic fibrosis transmembrane conductance regulator OS=Ateles geoffroyi GN=CFTR PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 9.107e-13 Identity = 34/151 (22.52%), Postives = 71/151 (47.02%), Query Frame = 1 Query: 82 RWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPG----------------MVESN--RPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E ++E++ + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1097 RWFQMRIEIIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKPTKSTKAYKNGQLSKVMIIENSHVKKNDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 32.7278 bits (73), Expect = 9.107e-13 Identity = 17/49 (34.69%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628 ++GRTG+GKS++L+A + + E GE I+G L RK + Sbjct: 1242 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVI 1289 HSP 3 Score: 23.483 bits (49), Expect = 9.107e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFTGTFRKNLDPYEQ 1309
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_BOVIN (Cystic fibrosis transmembrane conductance regulator OS=Bos taurus GN=CFTR PE=2 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 1.177e-12 Identity = 37/155 (23.87%), Postives = 69/155 (44.52%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI L + + ++ + +V RV +ID+P+E S RP WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYTDGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 30.4166 bits (67), Expect = 1.177e-12 Identity = 18/57 (31.58%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + +GE I+G L RK + FS Sbjct: 1243 LLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298 HSP 3 Score: 23.483 bits (49), Expect = 1.177e-12 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFSGTFRKNLDPYGQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_SHEEP (Cystic fibrosis transmembrane conductance regulator OS=Ovis aries GN=CFTR PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.965e-12 Identity = 37/155 (23.87%), Postives = 69/155 (44.52%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI L + + ++ + +V RV +ID+P+E S RP WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 30.4166 bits (67), Expect = 1.965e-12 Identity = 18/57 (31.58%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + +GE I+G L RK + FS Sbjct: 1243 LLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298 HSP 3 Score: 23.483 bits (49), Expect = 1.965e-12 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MUNRE (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus reevesi GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.965e-12 Identity = 37/155 (23.87%), Postives = 69/155 (44.52%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI L + + ++ + +V RV +ID+P+E S RP WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQLSKVMVIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 30.4166 bits (67), Expect = 1.965e-12 Identity = 18/57 (31.58%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + +GE I+G L RK + FS Sbjct: 1243 LLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298 HSP 3 Score: 23.483 bits (49), Expect = 1.965e-12 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFSGTFRKNLDPYGQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MUNMU (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus muntjak GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.965e-12 Identity = 37/155 (23.87%), Postives = 69/155 (44.52%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI L + + ++ + +V RV +ID+P+E S RP WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQLSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 30.4166 bits (67), Expect = 1.965e-12 Identity = 18/57 (31.58%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + +GE I+G L RK + FS Sbjct: 1243 LLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298 HSP 3 Score: 23.483 bits (49), Expect = 1.965e-12 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFSGTFRKNLDPYGQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MUSPF (Cystic fibrosis transmembrane conductance regulator OS=Mustela putorius furo GN=CFTR PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 3.279e-12 Identity = 36/156 (23.08%), Postives = 69/156 (44.23%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSE-----------------APGMVESN---RPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I I +++ G V G++L+ +NI L + + ++ + +V RV +ID+P+E + ++ N R WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1096 STLRWFQMRMEIIFVIFFIAITFISILTTGEGVGAV------GIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPAEESKPPTKSFKPSKDVQLSKVLITENHHVREDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1245 HSP 2 Score: 33.8834 bits (76), Expect = 3.279e-12 Identity = 19/57 (33.33%), Postives = 30/57 (52.63%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L + RK + FS Sbjct: 1246 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQEWRKAFGVIPQKVFIFS 1301 HSP 3 Score: 23.483 bits (49), Expect = 3.279e-12 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1294 PQKVFIFSGTFRKNLDPYGQ 1313
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MOUSE (Cystic fibrosis transmembrane conductance regulator OS=Mus musculus GN=Cftr PE=1 SV=2) HSP 1 Score: 56.225 bits (134), Expect = 1.118e-11 Identity = 35/152 (23.03%), Postives = 69/152 (45.39%), Query Frame = 1 Query: 82 RWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYID--------------LPSEAPGMV-----ESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 RW +R++ + + ++ +++ G E T G++L+ +NI + L + + ++ + +V RV +ID LP E V E + WPS G + +D+ ++Y + VL +SF++SP ++VG Sbjct: 1092 RWFQMRIDMIFVLFFIVVTFISILTTGEGEG------TAGIILTLAMNIMSTLQWAVNSSIDTDSLMRSVSRVFKFIDIQTEESMYTQIIKELPREGSSDVLVIKNEHVKKSDIWPSGGEMVVKDLTVKYMDDGNAVLENISFSISPGQRVG 1237 HSP 2 Score: 35.039 bits (79), Expect = 1.118e-11 Identity = 18/57 (31.58%), Postives = 33/57 (57.89%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + + +G+ I+G + L + RK +T FS Sbjct: 1238 LLGRTGSGKSTLLSAFLRMLNI-KGDIEIDGVSWNSVTLQEWRKAFGVITQKVFIFS 1293
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_RAT (Cystic fibrosis transmembrane conductance regulator OS=Rattus norvegicus GN=Cftr PE=1 SV=3) HSP 1 Score: 54.6842 bits (130), Expect = 1.118e-11 Identity = 32/152 (21.05%), Postives = 71/152 (46.71%), Query Frame = 1 Query: 82 RWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSE---------------APGMV----ESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 RW +R++ + + ++ +++ G E T G++L+ +NI + L + + ++ + +V RV +ID+ +E +P + E + WPS G + +D+ ++Y + +L +SF++SP ++VG Sbjct: 1092 RWFQMRIDMIFVLFFIVVTFISILTTGEGEG------TTGIILTLAMNIMSTLQWAVNSSIDTDSLMRSVSRVFKFIDIQTEESICTKIMKELHSEDSPNALVIKNEHVKKCDTWPSGGEMVVKDLTVKYVDDGNAILENISFSISPGQRVG 1237 HSP 2 Score: 36.5798 bits (83), Expect = 1.118e-11 Identity = 19/57 (33.33%), Postives = 33/57 (57.89%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + + +GE I+G + L + RK +T FS Sbjct: 1238 LLGRTGSGKSTLLSAFLRMLNI-KGEIQIDGVSWNSMTLQEWRKAFGVITQKVFIFS 1293
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_ORNAN (Cystic fibrosis transmembrane conductance regulator OS=Ornithorhynchus anatinus GN=CFTR PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.523e-11 Identity = 37/152 (24.34%), Postives = 70/152 (46.05%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEA--PGMVESNRPPPA--------------WPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I L+ +++ G E +V G++L+ +NI L + + ++ + +V RV +ID+P+E P N+ WPS G + +D+ +Y P +L +SF++S ++VG Sbjct: 1098 STLRWFQMRIEMVFVIFFILVTFISILTTGDGEGKV------GIVLTLAMNIMGTLQWAVNASIDVDSLMRSVSRVFKFIDMPTEEHRPTHPAKNKDISGVLIIENQHVKREKNWPSGGQMTVQDLTAKYLDGGPAILDNISFSISSGQRVG 1243 HSP 2 Score: 28.1054 bits (61), Expect = 1.523e-11 Identity = 17/57 (29.82%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + E G+ I+G + RK + FS Sbjct: 1244 LLGRTGSGKSTLLFAFLRLLNTE-GDIRIDGISWDAVPVQQWRKAFGVIPQKVFIFS 1299 HSP 3 Score: 23.8682 bits (50), Expect = 1.523e-11 Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G+ R NLDP+ + Sbjct: 1292 PQKVFIFSGSFRKNLDPYGQ 1311
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_TRIVU (Cystic fibrosis transmembrane conductance regulator OS=Trichosurus vulpecula GN=CFTR PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.523e-11 Identity = 37/153 (24.18%), Postives = 71/153 (46.41%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAP----------------GMVESNR-PPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + ++ +++ G E +V G+LL+ +NI + L + + ++ + +V RV +ID+PSE P ++E+ WPS G + +D+ +Y VL +SF++S ++VG Sbjct: 1093 STLRWFQMRIEIIFVTFFCIVTFISILTTGDGEGRV------GILLTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPSEEPLPPKPTKSKKNQLSQVLIIENEHVKKENWPSGGQMTVKDLTAKYIDGGNAVLENISFSISSGQRVG 1239 HSP 2 Score: 29.261 bits (64), Expect = 1.523e-11 Identity = 17/57 (29.82%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + + G+ I+G L RK + FS Sbjct: 1240 LLGRTGSGKSTLLAAFLRLLNTQ-GDIQIDGVSWDSVPLQQWRKAFGVIPQKVFIFS 1295 HSP 3 Score: 23.483 bits (49), Expect = 1.523e-11 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1288 PQKVFIFSGTFRKNLDPYGQ 1307 The following BLAST results are available for this feature:
BLAST of EY674957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY674957 ID=EY674957; Name=EY674957; organism=Citrus sinensis; type=EST; length=1023bpback to top |