EY674957

Overview
NameEY674957
Unique NameEY674957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.799e-18
Identity = 41/148 (27.70%), Postives = 65/148 (43.92%), Query Frame = 1
Query:   40 DNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYI-DLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            D N    L    + RW  +R++ L  I+ +++A    +           AS+ GL LSY + ++ LL   +R  +  +    + E +  YI     E     +    P  WPS G I F+D  +RYR   P VL GL+  +   + VG
Sbjct: 1016 DENSSHLLYFNCALRWFALRMDILMNIVTFVVALLVTLSFSSIS-----ASSKGLSLSYIIQLSGLLQVCVRTGTETQAKFTSAELLREYILTCVPEHTHPFKVGTCPKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVG 1158          

HSP 2 Score: 41.5874 bits (96), Expect = 1.799e-18
Identity = 23/49 (46.94%), Postives = 30/49 (61.22%), Query Frame = 2
Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628
            IVGRTG+GKSS+  ALF+ V+   G   I+  D+   GL DLR  L  +
Sbjct: 1159 IVGRTGSGKSSLGMALFRLVEPASGTIIIDEVDICTVGLEDLRTKLTMI 1207          

HSP 3 Score: 29.6462 bits (65), Expect = 1.799e-18
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  630 PQSPVLFPGNGRFNLDP 680
            PQ PVLF G  R+NLDP
Sbjct: 1208 PQDPVLFVGTVRYNLDP 1224          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.862e-18
Identity = 55/188 (29.26%), Postives = 92/188 (48.94%), Query Frame = 1
Query:   10 RMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGM------VESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVGNSWKNWCRKI*HA*CFISICETGKG 555
            R   I   ++D N++   A+ +   W++IRLE L  I++++++ F++  NG + + ++  S     +S   +IT+ L    RQ    E  +N+ ERV  YI LPSE  G         S +    WP  G+I+F +V + Y     P L  ++F+V  +EK+G   +    K   A C   + E  KG
Sbjct:  978 RFIGIMNDNIDKNLKCEFASFAVEMWISIRLELLSSIIVFIVSLFSLF-NGYSNSALSILS-----VSTARSITSYLKSACRQMVDLERKMNSFERVNNYIKLPSEGSGSGVKSMEFISEKDLLNWPEKGNIQFNNVQVNYNSNSVPSLKDITFSVESNEKIGIVGRTGAGKSTIANCLFRLVECSKG 1159          

HSP 2 Score: 27.335 bits (59), Expect = 2.862e-18
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ P LF G  R N+DP N+
Sbjct: 1184 PQEPWLFSGTIRSNIDPLNQ 1203          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: MRP9_RAT (Multidrug resistance-associated protein 9 OS=Rattus norvegicus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.017e-18
Identity = 41/148 (27.70%), Postives = 65/148 (43.92%), Query Frame = 1
Query:   40 DNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDL-PSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            D N    L    + RW  +R++ L  I+ +++A    +           AS+ GL LSY + ++ LL   +R  +  +    + E +  YI     E     +    P  WPS G I F+D  +RYR   P VL GL+  +   + VG
Sbjct: 1016 DENSSHLLYFNCALRWFALRMDILMNIVTFVVALLVTLSFSSIS-----ASSKGLSLSYIIQLSGLLQVCVRTGTETQAKFTSAELMREYISTCVPEHTQSFKVGTCPKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVG 1158          

HSP 2 Score: 40.0466 bits (92), Expect = 3.017e-18
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 2
Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628
            IVGRTG+GKSS+  ALF+ V+   G   I+  D+   GL +LR  L  +
Sbjct: 1159 IVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMI 1207          

HSP 3 Score: 29.6462 bits (65), Expect = 3.017e-18
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  630 PQSPVLFPGNGRFNLDP 680
            PQ PVLF G  R+NLDP
Sbjct: 1208 PQDPVLFVGTVRYNLDP 1224          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: MRP9_HUMAN (Multidrug resistance-associated protein 9 OS=Homo sapiens GN=ABCC12 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 3.908e-18
Identity = 37/134 (27.61%), Postives = 59/134 (44.03%), Query Frame = 1
Query:   82 RWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDL-PSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            RW  +R++ L  I+ + +A    +            S+ GL LSY + ++ LL   +R  +  +    +VE +  YI     E    ++    P  WPS G I F D  +RYR   P VL  L+  +   + VG
Sbjct: 1023 RWFALRMDVLMNILTFTVALLVTLSFSSIST-----SSKGLSLSYIIQLSGLLQVCVRTGTETQAKFTSVELLREYISTCVPECTHPLKVGTCPKDWPSRGEITFRDYQMRYRDNTPLVLDSLNLNIQSGQTVG 1151          

HSP 2 Score: 38.891 bits (89), Expect = 3.908e-18
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 2
Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628
            IVGRTG+GKSS+  ALF+ V+   G   I+  D+    L DLR  L  +
Sbjct: 1152 IVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICILSLEDLRTKLTVI 1200          

HSP 3 Score: 32.7278 bits (73), Expect = 3.908e-18
Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  618 LII*PQSPVLFPGNGRFNLDPF 683
            L + PQ PVLF G  R+NLDPF
Sbjct: 1197 LTVIPQDPVLFVGTVRYNLDPF 1218          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: ABCC6_DICDI (ABC transporter C family member 6 OS=Dictyostelium discoideum GN=abcC6 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.796e-17
Identity = 59/193 (30.57%), Postives = 92/193 (47.67%), Query Frame = 1
Query:   31 KSMDNNIRFTLA----NTSSNRWLTIRLETLGGIMIW---LIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPA-----------WPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVGNSWKNWCRKI*HA*CFISICETGKG 555
            K M +NI   L     + + +RW+++RLE +G IM++   LIAT  +  NG A   V  A          L++   LS  +R+    E  +N+ +R+ +YI++P E   +V +N                WP+ G I+F++V ++YRP   P L  LSF V  SEK+G   +    K   A     + E  KG
Sbjct:  975 KEMFDNININLGCFFYSFAVHRWVSMRLEVMGWIMVFFTSLIATLFISNNGLAALSVTTA----------LSLNGYLSWGIRRIVDLEVKMNSFQRIQSYIEIPKEGNKLVSTNSNEVDNHTIKDADLVNWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKG 1157          

HSP 2 Score: 30.8018 bits (68), Expect = 1.796e-17
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ P +F G  R N+DPFNE
Sbjct: 1182 PQDPFIFTGTIRSNIDPFNE 1201          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.932e-17
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 1
Query:   49 IRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            + F L+N +   W+ +R+ETL  + ++  A   ++     +  +A    +GL LSY L +T     + R      NS+ +VER+  Y+++P E P +++  RPP +WPS+G+I  +++ +RYRP  P VL G+S T     +VG
Sbjct:  938 VLFFLSNAAME-WVILRIETLQNVTLFTCALLLILI---PKGYIA-PGLVGLSLSYALTLTQTQVFLTRWYCTLSNSIISVERIKQYMNIPEEPPAIIDDKRPPSSWPSNGTIHLQELKIRYRPNAPLVLKGISCTFREGTRVG 1076          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.460e-16
Identity = 49/145 (33.79%), Postives = 71/145 (48.97%), Query Frame = 1
Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVGNSWKNWCRK 507
            S+  WL  RL+ L  +   L     V         V   S  GL ++Y LN+ +L + ++      EN + +VER+  YID+PSE   ++ES RP  +WP  G I   ++ +RY P LP VL GL+ T     K G   +  C K
Sbjct: 1141 SAMEWLCFRLDLLSTVAFALSLVILVS----VPEGVINPSFAGLAVTYALNLNSLQATLIWTLCDLENKMISVERMLQYIDIPSEPSLVIESTRPEKSWPCRGEITICNLQVRYGPHLPMVLRGLTCTFRGGLKTGIVGRTGCGK 1281          

HSP 2 Score: 29.261 bits (64), Expect = 1.460e-16
Identity = 15/35 (42.86%), Postives = 18/35 (51.43%), Query Frame = 3
Query:  585 LSLG*RICEKFLII*PQSPVLFPGNGRFNLDPFNE 689
            L++G       L I PQ P +F G  R NLDP  E
Sbjct: 1307 LTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLEE 1341          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: ABCC8_HUMAN (ATP-binding cassette transporter sub-family C member 8 OS=Homo sapiens GN=ABCC8 PE=1 SV=5)

HSP 1 Score: 79.337 bits (194), Expect = 1.896e-16
Identity = 48/173 (27.75%), Postives = 92/173 (53.18%), Query Frame = 1
Query:   40 DNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEA-PGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVGNSWKNWCRKI*HA*CFISICETGKG 555
            D+N   +L  T++NRWL +R+E +G  ++ + A  ++  +   E     A  +GL L+Y L ++N L+ ++R  +  E  L AV+R+   +   +E+  G++  +  P  WP  G I+ +++ +RY   L PVL  ++  +SP +K+G   +    K   +  F  + +T +G
Sbjct: 1231 DSNNIASLFLTAANRWLEVRMEYIGACVVLIAAVTSISNSLHRELS---AGLVGLGLTYALMVSNYLNWMVRNLADMELQLGAVKRIHGLLKTEAESYEGLLAPSLIPKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEG 1400          

HSP 2 Score: 28.1054 bits (61), Expect = 1.896e-16
Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  633 QSPVLFPGNGRFNLDP 680
            Q PVLF G  RFNLDP
Sbjct: 1426 QDPVLFSGTIRFNLDP 1441          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.053e-16
Identity = 58/196 (29.59%), Postives = 92/196 (46.94%), Query Frame = 1
Query:   31 KSMDNNIRFTLA----NTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLL-LSYT--LNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVE--------------SNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVGNSWKNWCRKI*HA*CFISICETGKG 555
            K M +NI   L     + + +RW+++RLE +G IM++  +  A +          F S  GL  LS T  L++   LS  +R+    E  +N+ +R+ +YI++P E   ++               SN     WP+ G I+F++V ++YRP   P L  LSF V  SEK+G   +    K   A     + E  KG
Sbjct:  942 KEMFDNININLGCIFYSFAVHRWISMRLEVMGCIMVFFTSLAAAL----------FTSNNGLAALSVTTALSLNGYLSWGVRRIVELEVKMNSFQRIQSYIEIPKEGNKLISTGTNQVDSDGLKTISNGDLVNWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKG 1127          

HSP 2 Score: 30.8018 bits (68), Expect = 7.053e-16
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ P +F G  R N+DPFNE
Sbjct: 1152 PQDPFIFTGTIRSNIDPFNE 1171          
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 7.122e-16
Identity = 49/158 (31.01%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   10 RMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAV-MQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            R  K N   +D  +R    + ++  WL +R+E L  ++        V   +G  +  +A     GL ++Y LN+   LS  +    + EN + ++ER+  Y  +  EAP ++E  RPP +WP++G+I+  DV +RY   LP VLHG+S      +K+G
Sbjct: 1147 RFIKRNLYLLDCFVRPFFCSIAAIEWLCLRMELLSTLVFAFCMVLLVSFPHGTIDPSMA-----GLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIVGEAPAIIEDFRPPSSWPATGTIELVDVKVRYAENLPTVLHGVSCVFPGGKKIG 1299          
The following BLAST results are available for this feature:
BLAST of EY674957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
MRP9_MOUSE1.799e-1827.70Multidrug resistance-associated protein 9 OS=Mus m... [more]
ABCC9_DICDI2.862e-1829.26ABC transporter C family member 9 OS=Dictyostelium... [more]
MRP9_RAT3.017e-1827.70Multidrug resistance-associated protein 9 OS=Rattu... [more]
MRP9_HUMAN3.908e-1827.61Multidrug resistance-associated protein 9 OS=Homo ... [more]
ABCC6_DICDI1.796e-1730.57ABC transporter C family member 6 OS=Dictyostelium... [more]
AB8C_ARATH4.932e-1732.64ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB7C_ARATH1.460e-1633.79ABC transporter C family member 7 OS=Arabidopsis t... [more]
ABCC8_HUMAN1.896e-1627.75ATP-binding cassette transporter sub-family C memb... [more]
ABCCE_DICDI7.053e-1629.59ABC transporter C family member 14 OS=Dictyosteliu... [more]
AB5C_ARATH7.122e-1631.01ABC transporter C family member 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674957 ID=EY674957; Name=EY674957; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGGATGGCCAAAATCAATGGAAAGTCGATGGATAATAACAT
CAGATTTACCCTTGCAAATACTAGTTCAAATCGTTGGCTCACCATCCGGT
TGGAAACACTAGGAGGCATCATGATTTGGTTGATAGCAACTTTTGCAGTC
ATGCAGAATGGAAGAGCAGAAAATCAGGTCGCATTTGCATCTACGATGGG
TTTACTTCTCAGTTATACTTTGAACATCACCAATCTGTTGAGTGGCGTAT
TGAGACAAGCAAGCAGGGCTGAGAATAGTTTAAATGCCGTTGAGCGTGTT
GGAACATATATAGATCTTCCTTCTGAAGCTCCGGGCATGGTAGAGAGTAA
TCGCCCCCCACCTGCTTGGCCTTCATCAGGATCAATAAAGTTTGAGGACG
TCGTCCTACGCTATAGGCCTGAACTTCCTCCAGTCTTGCATGGGTTATCA
TTCACAGTTTCCCCAAGTGAGAAAGTGGGAAATAGTTGGAAGAACTGGTG
CCGGAAAATCTAGCATGCTTAATGCTTTATTTCAATTTGTGAAACTGGAA
AGGGGGGAAAAATCCATTGAGGGTTGTGATGTCTCTAAGTTTGGGTTAAC
GGATTTGCGAAAAGTTCTTAATTATCTAACCACAATCACCAGTTCTTTTT
CCCGGAAATGGGAGGTTCAATCTTGATCCCTTTAATGAACCCCAGGGAGC
CTGAATTTTTGGGAAAGGTTTTAAAAAGGGCCACTCTGAAAGAAGTCTCT
CAGGGAAAAATTTCCTTTGGGTTGGGCCCCCAAAGGGCCACAAAAGGGGG
GGCAAAAATTTTTCAGGTGTTGGAAAAAAAAAAAAAATGGTTTAATTTCT
TGGGCCCCGAACCCCCGCGGCGCCAAAAAAAATAAAAAAAATTTTTGGTT
TTTCGGGGAAAGAAAAACAACCGTCCGGCCCCGGGTTGTTTAATGTTCGG
AGAGCAAAAAGAGCCGTCCTCTTTTTCCCCCACAAAAAAAACCACCCCAC
CCCCGGGGAAGAAGAAAAAAAAA
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