EY674957 | Citrus Genome Database

Overview


Name	EY674957
Unique Name	EY674957
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1023

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.345e-15
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 5.345e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 5.345e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MACNE (Cystic fibrosis transmembrane conductance regulator OS=Macaca nemestrina GN=CFTR PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.345e-15
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 5.345e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 5.345e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MACMU (Cystic fibrosis transmembrane conductance regulator OS=Macaca mulatta GN=CFTR PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 5.345e-15
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 5.345e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 5.345e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MACFU (Cystic fibrosis transmembrane conductance regulator OS=Macaca fuscata fuscata GN=CFTR PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.345e-15
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 5.345e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 5.345e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MACFA (Cystic fibrosis transmembrane conductance regulator OS=Macaca fascicularis GN=CFTR PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.345e-15
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 5.345e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 5.345e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.345e-15
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 5.345e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 5.345e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_LOXAF (Cystic fibrosis transmembrane conductance regulator OS=Loxodonta africana GN=CFTR PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.943e-15
Identity = 37/155 (23.87%), Postives = 72/155 (46.45%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI N L   +  +   ++ + +V R+  +ID+P+E     +S +PP                     WPS G +  +D+  +Y      +L  +SF++SP ++VG
Sbjct: 1095 STLRWFQMRIEIIFVIFFIAVTFVSILTTGEGEG------TIGIILTLAMNIMNTLQWAVNSSIDVDSLMRSVSRIFKFIDMPTEESKPAKSVKPPKDGQLSKVMIIENQHVKKDYNWPSGGHMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1243

HSP 2 Score: 33.113 bits (74), Expect = 8.943e-15
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1244 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1299

HSP 3 Score: 23.483 bits (49), Expect = 8.943e-15
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1292 PQKVFIFSGTFRKNLDPYEQ 1311

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_COLGU (Cystic fibrosis transmembrane conductance regulator OS=Colobus guereza GN=CFTR PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.157e-14
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I    +   +++  G  E       T+G++L+  +NI + L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  +Y     P+L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLLKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYTEGGNPILENISFSISPGQRVG 1242

HSP 2 Score: 31.5722 bits (70), Expect = 1.157e-14
Identity = 18/57 (31.58%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +   +GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLN-TKGEIQIDGVSWDSVTLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 1.157e-14
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.935e-14
Identity = 38/155 (24.52%), Postives = 70/155 (45.16%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  I   ++   +++  G  E QV      G++L+  +NI   L   +  +   ++ + +V RV  +ID+P+E      S +P                      WPS G +  +D+  RY      +L  +SF++SP ++VG
Sbjct: 1094 STLRWFQMRIEMVFVIFFIVVTFISILTTGEGEGQV------GIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKSTRSIKPSKDCHLSKVMVFENPHVKKDDIWPSGGQMTVKDLTARYLDGGNAILENISFSISPGQRVG 1242

HSP 2 Score: 33.113 bits (74), Expect = 1.935e-14
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTG+GKS++L+A  + +  E GE  I+G       L   RK    +      FS
Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298

HSP 3 Score: 23.483 bits (49), Expect = 1.935e-14
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310

[Close]

BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.184e-14
Identity = 36/155 (23.23%), Postives = 70/155 (45.16%), Query Frame = 1

Query:   73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480
            S+ RW  +R+E +  +    +   +++  G  E       T+G++L+  +NI   L   +  +   ++ + +V RV  +ID+P+E     +S +P                      WPS G +  +D+  RY      +L  +SF++SP ++VG
Sbjct: 1095 STLRWFQMRIEMIFVVFFIAVTFISILTTGEGEG------TVGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGRSTKSIKPSKDCQLSKVMIFENLHVKKDDIWPSGGQMTVKDLTARYIDSGNAILENISFSISPGQRVG 1243

HSP 2 Score: 33.113 bits (74), Expect = 4.184e-14
Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2

Query:  482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652
            ++GRTGAGKS++L+A  + +  E G+  I+G       L   RK    +      FS
Sbjct: 1244 LLGRTGAGKSTLLSAFLRLLNTE-GDIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1299

HSP 3 Score: 23.483 bits (49), Expect = 4.184e-14
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3

Query:  630 PQSPVLFPGNGRFNLDPFNE 689
            PQ   +F G  R NLDP+ +
Sbjct: 1292 PQKVFIFSGTFRKNLDPYEQ 1311

The following BLAST results are available for this feature:

BLAST of EY674957 vs. ExPASy Swiss-Prot

BLAST of EY674957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110


Match Name	E-value	Identity	Description
CFTR_PAPAN	5.345e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_MACNE	5.345e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_MACMU	5.345e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_MACFU	5.345e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_MACFA	5.345e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_CERAE	5.345e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_LOXAF	8.943e-15	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_COLGU	1.157e-14	23.87	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_MICMU	1.935e-14	24.52	Cystic fibrosis transmembrane conductance regulato...	[more]
CFTR_OTOGA	4.184e-14	23.23	Cystic fibrosis transmembrane conductance regulato...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-401-003-G12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY674957 ID=EY674957; Name=EY674957; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGGATGGCCAAAATCAATGGAAAGTCGATGGATAATAACAT
CAGATTTACCCTTGCAAATACTAGTTCAAATCGTTGGCTCACCATCCGGT
TGGAAACACTAGGAGGCATCATGATTTGGTTGATAGCAACTTTTGCAGTC
ATGCAGAATGGAAGAGCAGAAAATCAGGTCGCATTTGCATCTACGATGGG
TTTACTTCTCAGTTATACTTTGAACATCACCAATCTGTTGAGTGGCGTAT
TGAGACAAGCAAGCAGGGCTGAGAATAGTTTAAATGCCGTTGAGCGTGTT
GGAACATATATAGATCTTCCTTCTGAAGCTCCGGGCATGGTAGAGAGTAA
TCGCCCCCCACCTGCTTGGCCTTCATCAGGATCAATAAAGTTTGAGGACG
TCGTCCTACGCTATAGGCCTGAACTTCCTCCAGTCTTGCATGGGTTATCA
TTCACAGTTTCCCCAAGTGAGAAAGTGGGAAATAGTTGGAAGAACTGGTG
CCGGAAAATCTAGCATGCTTAATGCTTTATTTCAATTTGTGAAACTGGAA
AGGGGGGAAAAATCCATTGAGGGTTGTGATGTCTCTAAGTTTGGGTTAAC
GGATTTGCGAAAAGTTCTTAATTATCTAACCACAATCACCAGTTCTTTTT
CCCGGAAATGGGAGGTTCAATCTTGATCCCTTTAATGAACCCCAGGGAGC
CTGAATTTTTGGGAAAGGTTTTAAAAAGGGCCACTCTGAAAGAAGTCTCT
CAGGGAAAAATTTCCTTTGGGTTGGGCCCCCAAAGGGCCACAAAAGGGGG
GGCAAAAATTTTTCAGGTGTTGGAAAAAAAAAAAAAATGGTTTAATTTCT
TGGGCCCCGAACCCCCGCGGCGCCAAAAAAAATAAAAAAAATTTTTGGTT
TTTCGGGGAAAGAAAAACAACCGTCCGGCCCCGGGTTGTTTAATGTTCGG
AGAGCAAAAAGAGCCGTCCTCTTTTTCCCCCACAAAAAAAACCACCCCAC
CCCCGGGGAAGAAGAAAAAAAAA