EY674957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_HORSE (Cystic fibrosis transmembrane conductance regulator OS=Equus caballus GN=CFTR PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 6.995e-14 Identity = 36/155 (23.23%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDSKPTKSVKPSKDGQLSKVMIIENQYVKKDDIWPSGGQMTVKDLTAKYTDGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 33.113 bits (74), Expect = 6.995e-14 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298 HSP 3 Score: 23.483 bits (49), Expect = 6.995e-14 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFSGTFRKNLDPYGQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_RHIFE (Cystic fibrosis transmembrane conductance regulator OS=Rhinolophus ferrumequinum GN=CFTR PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.169e-13 Identity = 36/155 (23.23%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + + + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G I +D+ +Y +L +SF++SP ++VG Sbjct: 1095 STLRWFQMRIEMIFVVFFVAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPAEESKYTKSVKPYKDGQLSKVMILENQHVKKDDIWPSGGQITVKDLTAKYIDGGNAILENISFSISPGQRVG 1243 HSP 2 Score: 31.5722 bits (70), Expect = 1.169e-13 Identity = 14/31 (45.16%), Postives = 24/31 (77.42%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEG 574 ++GRTG+GKS++L+AL + + E GE ++G Sbjct: 1244 LLGRTGSGKSTLLSALLRLLNTE-GEIQVDG 1273 HSP 3 Score: 23.483 bits (49), Expect = 1.169e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1292 PQKVFIFSGTFRKNLDPYGQ 1311
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_SQUAC (Cystic fibrosis transmembrane conductance regulator OS=Squalus acanthias GN=CFTR PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.511e-13 Identity = 36/150 (24.00%), Postives = 68/150 (45.33%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPG--------------MVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R++ + + + A+ + E QV G++L+ +NIT+ L + + + + +V RV YID+P E ++E+ WPS G + ++ +Y + VL LSF+V+ ++VG Sbjct: 1108 STLRWFQMRIDIVFVLFFIAVTFIAIATHDVGEGQV------GIILTLAMNITSTLQWAVNSSIDVDGLMRSVSRVFKYIDIPPEGSETKNRHNANNPSDVLVIENKHLTKEWPSGGQMMVNNLTAKYTSDGRAVLQDLSFSVNAGQRVG 1251 HSP 2 Score: 36.1946 bits (82), Expect = 1.511e-13 Identity = 21/57 (36.84%), Postives = 31/57 (54.39%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTGAGKS++L+AL + + E GE I+G + L RK + FS Sbjct: 1252 LLGRTGAGKSTLLSALLRLLSTE-GEIQIDGISWNSVSLQKWRKAFGVIPQKVFVFS 1307 HSP 3 Score: 23.0978 bits (48), Expect = 1.511e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1300 PQKVFVFSGTFRKNLDPYEQ 1319
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2) HSP 1 Score: 58.151 bits (139), Expect = 1.511e-13 Identity = 36/156 (23.08%), Postives = 70/156 (44.87%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSE-----------------APGMVESNR---PPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI L + + ++ + +V RV +ID+P+E + + NR WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1095 STLRWFQMRMEIIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMGTLQWAVNSSIEVDSLMRSVSRVFKFIDMPTEESKPPTKSFKPSKDAQLSKVTITENRHVREDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1244 HSP 2 Score: 35.4242 bits (80), Expect = 1.511e-13 Identity = 20/57 (35.09%), Postives = 31/57 (54.39%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+AL + V E GE I+G L + R+ + FS Sbjct: 1245 LLGRTGSGKSTLLSALLRLVNTE-GEIQIDGVSWDSIPLQEWRRAFGVIPQKVFIFS 1300 HSP 3 Score: 23.483 bits (49), Expect = 1.511e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1293 PQKVFIFSGTFRKNLDPYGQ 1312
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4) HSP 1 Score: 60.4622 bits (145), Expect = 1.511e-13 Identity = 35/155 (22.58%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + + +A +++ G E +V G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G + + + +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVLFFIAVAFISILTTGEGEGRV------GIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEETKSTKSIKPSSNCQLSKVMIIENQHVKKDDVWPSGGQMTVKGLTAKYIDSGNAILENISFSISPGQRVG 1242 HSP 2 Score: 33.113 bits (74), Expect = 1.511e-13 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1298 HSP 3 Score: 23.483 bits (49), Expect = 1.511e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFSGTFRKNLDPYEQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_ATEAB (Cystic fibrosis transmembrane conductance regulator OS=Atelerix albiventris GN=CFTR PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.954e-13 Identity = 37/155 (23.87%), Postives = 72/155 (46.45%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSE----------------APGMVESN---RPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI N L + + ++ + +V RV +ID+P+E + M+ N + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1096 STLRWFQMRIEMIFVIFFIAVTFISILTTGDGEGRV------GIILTLAMNIMNTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEIKPSKPVKPSKEGPLSKVMIIENEHVKKDDIWPSGGQMTVKDLTAKYIESGNAILENISFSISPGQRVG 1244 HSP 2 Score: 33.113 bits (74), Expect = 1.954e-13 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1245 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1300 HSP 3 Score: 23.483 bits (49), Expect = 1.954e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1293 PQKVFIFSGTFRKNLDPYEQ 1312
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.533e-13 Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 37 MDNNIRFTLANTSSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 +D N + ++N WL RLET+ I++ A ++ + +G+ LSY L++ L ++ N + +VER+ Y L EAP ++E RPP WP +G ++ D+ +RYR E P VL G+S T K+G Sbjct: 1031 IDTNASPFFHSFAANEWLIQRLETVSAIVLASTAFCMIL----LPTGTFSSGFIGMALSYGLSLNMGLVYSVQNQCYLANWIISVERLNQYTHLTPEAPEVIEETRPPVNWPVTGRVEISDLQIRYRRESPLVLKGISCTFEGGHKIG 1174
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_DASNO (Cystic fibrosis transmembrane conductance regulator OS=Dasypus novemcinctus GN=CFTR PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 3.264e-13 Identity = 35/155 (22.58%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV ++D+P+E +S + P WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1095 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFVDIPTEENKPTKSIKLPKDGQLSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVG 1243 HSP 2 Score: 32.7278 bits (73), Expect = 3.264e-13 Identity = 18/57 (31.58%), Postives = 30/57 (52.63%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + +GE I+G L + RK + FS Sbjct: 1244 LLGRTGSGKSTLLSAFLRLLN-TKGEIQIDGVSWDSITLQEWRKAFGVIPQKVFIFS 1299 HSP 3 Score: 23.483 bits (49), Expect = 3.264e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1292 PQKVFIFSGTFRKNLDPYGQ 1311
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.264e-13 Identity = 36/155 (23.23%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKP-TKSTKPYKNGQLSKLMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 33.113 bits (74), Expect = 3.264e-13 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1242 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1297 HSP 3 Score: 23.483 bits (49), Expect = 3.264e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFSGTFRKNLDPYEQ 1309
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_HUMAN (Cystic fibrosis transmembrane conductance regulator OS=Homo sapiens GN=CFTR PE=1 SV=3) HSP 1 Score: 59.3066 bits (142), Expect = 3.264e-13 Identity = 36/155 (23.23%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKP-TKSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 33.113 bits (74), Expect = 3.264e-13 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1242 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1297 HSP 3 Score: 23.483 bits (49), Expect = 3.264e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFSGTFRKNLDPYEQ 1309 The following BLAST results are available for this feature:
BLAST of EY674957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY674957 ID=EY674957; Name=EY674957; organism=Citrus sinensis; type=EST; length=1023bpback to top |