EY674957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_GORGO (Cystic fibrosis transmembrane conductance regulator OS=Gorilla gorilla gorilla GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.264e-13 Identity = 36/154 (23.38%), Postives = 72/154 (46.75%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSE---------------APGMVESN---RPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI + L + + ++ + +V RV +ID+P+E + M+ N + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDKPTKSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 33.113 bits (74), Expect = 3.264e-13 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1242 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1297 HSP 3 Score: 23.483 bits (49), Expect = 3.264e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFSGTFRKNLDPYEQ 1309
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_CARPS (Cystic fibrosis transmembrane conductance regulator OS=Carollia perspicillata GN=CFTR PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.264e-13 Identity = 33/155 (21.29%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI + L + + ++ + +V RV +ID+P+E + +P WP G + ++++ +Y +L +SF++SP ++VG Sbjct: 1095 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMSTLQWAMNSSIDVDSLMRSVSRVFKFIDMPTEESKSTKLIKPSKDDKLTKVMIIENQHVKKDDLWPLGGQMTIKNLIAKYTDNGNAILENISFSISPGQRVG 1243 HSP 2 Score: 34.2686 bits (77), Expect = 3.264e-13 Identity = 20/57 (35.09%), Postives = 30/57 (52.63%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+AL + + E GE I+G L RK + FS Sbjct: 1244 LLGRTGSGKSTLLSALLRLLNTE-GEIQIDGVSWDSVTLQQWRKAFGVIPQKVFIFS 1299 HSP 3 Score: 23.483 bits (49), Expect = 3.264e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1292 PQKVFIFSGTFRKNLDPYEQ 1311
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_HYLLE (Cystic fibrosis transmembrane conductance regulator OS=Hylobates leucogenys GN=CFTR PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 3.264e-13 Identity = 37/156 (23.72%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATF-AVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + +M ++ TF +++ G E ++ G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIF-VMFFIAVTFISILTTGEGEGRI------GIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKP-TKSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLSAKYTEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 34.6538 bits (78), Expect = 3.264e-13 Identity = 20/57 (35.09%), Postives = 30/57 (52.63%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+AL + + E GE I+G L RK + FS Sbjct: 1242 LLGRTGSGKSTLLSALLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1297 HSP 3 Score: 23.483 bits (49), Expect = 3.264e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFSGTFRKNLDPYEQ 1309
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_SAIBB (Cystic fibrosis transmembrane conductance regulator OS=Saimiri boliviensis boliviensis GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.219e-13 Identity = 35/155 (22.58%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E +S + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTKSTKAYKNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYVEGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 32.7278 bits (73), Expect = 4.219e-13 Identity = 17/49 (34.69%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628 ++GRTG+GKS++L+A + + E GE I+G L RK + Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVI 1290 HSP 3 Score: 23.483 bits (49), Expect = 4.219e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFTGTFRKNLDPYEQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_CALJA (Cystic fibrosis transmembrane conductance regulator OS=Callithrix jacchus GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.219e-13 Identity = 35/155 (22.58%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E +S + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTKSTKAYKNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 32.7278 bits (73), Expect = 4.219e-13 Identity = 17/49 (34.69%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628 ++GRTG+GKS++L+A + + E GE I+G L RK + Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVI 1290 HSP 3 Score: 23.483 bits (49), Expect = 4.219e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFTGTFRKNLDPYEQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_AOTNA (Cystic fibrosis transmembrane conductance regulator OS=Aotus nancymaae GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.219e-13 Identity = 35/155 (22.58%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRP-------------------PPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E +S + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEGKPTKSTKAYRNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVG 1242 HSP 2 Score: 32.7278 bits (73), Expect = 4.219e-13 Identity = 17/49 (34.69%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628 ++GRTG+GKS++L+A + + E GE I+G L RK + Sbjct: 1243 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVI 1290 HSP 3 Score: 23.483 bits (49), Expect = 4.219e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1291 PQKVFIFTGTFRKNLDPYEQ 1310
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_PIG (Cystic fibrosis transmembrane conductance regulator OS=Sus scrofa GN=CFTR PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 5.453e-13 Identity = 37/155 (23.87%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E S +P WPS G + +D+ +Y VL +SF++SP ++VG Sbjct: 1095 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPAEGDQPNRSFKPSKDGQLSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYVDGGNAVLENISFSISPGQRVG 1243 HSP 2 Score: 31.187 bits (69), Expect = 5.453e-13 Identity = 18/57 (31.58%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + E GE ++G L RK + FS Sbjct: 1244 LLGRTGSGKSTLLLAFLRLLNTE-GEIQVDGVSWDSITLQQWRKAFGVIPQKVFIFS 1299 HSP 3 Score: 23.483 bits (49), Expect = 5.453e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1292 PQKVFIFSGTFRKNLDPYGQ 1311
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_CALMO (Cystic fibrosis transmembrane conductance regulator OS=Callicebus moloch GN=CFTR PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 5.453e-13 Identity = 35/154 (22.73%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPG----------------MVESN--RPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E T+G++L+ +NI + L + + ++ + +V RV +ID+P+E ++E++ + WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEG------TVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKPTKSTKAYKNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 32.3426 bits (72), Expect = 5.453e-13 Identity = 17/49 (34.69%), Postives = 27/49 (55.10%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYL 628 ++GRTG+GKS++L+A + + E GE I+G L RK + Sbjct: 1242 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSVTLQQWRKAFGVI 1289 HSP 3 Score: 23.483 bits (49), Expect = 5.453e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFTGTFRKNLDPYEQ 1309
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_PANTR (Cystic fibrosis transmembrane conductance regulator OS=Pan troglodytes GN=CFTR PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 5.453e-13 Identity = 36/155 (23.23%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPP-------------------AWPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G++L+ +NI + L + + ++ + +V RV +ID+P+E +S +P WPS G + +D+ +Y +L +SF++SP ++VG Sbjct: 1094 STLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRV------GIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKP-TKSTKPYKNGQLSKVMIIENSHVKKDYIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVG 1241 HSP 2 Score: 33.113 bits (74), Expect = 5.453e-13 Identity = 19/57 (33.33%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L+A + + E GE I+G L RK + FS Sbjct: 1242 LLGRTGSGKSTLLSAFLRLLNTE-GEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFS 1297 HSP 3 Score: 23.483 bits (49), Expect = 5.453e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1290 PQKVFIFSGTFRKNLDPYEQ 1309
BLAST of EY674957 vs. ExPASy Swiss-Prot
Match: CFTR_DIDMA (Cystic fibrosis transmembrane conductance regulator OS=Didelphis marsupialis virginiana GN=CFTR PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 9.107e-13 Identity = 37/155 (23.87%), Postives = 70/155 (45.16%), Query Frame = 1 Query: 73 SSNRWLTIRLETLGGIMIWLIATFAVMQNGRAENQVAFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVGTYIDLPSEAPGMVESNRPPPA-------------------WPSSGSIKFEDVVLRYRPELPPVLHGLSFTVSPSEKVG 480 S+ RW +R+E + I + +++ G E +V G+LL+ +NI + L + + ++ + +V RV +ID+P+E P + + WPS G + +D+ +Y VL +SF++SP ++VG Sbjct: 1095 STLRWFQMRIELVFVIFFIAVTFISILTTGDGEGRV------GILLTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEEPLPAKPTKSLKKNQLSQVLIIENEHVNKENNWPSGGQMIVKDLTAKYTDGGNAVLENISFSISPGQRVG 1243 HSP 2 Score: 32.3426 bits (72), Expect = 9.107e-13 Identity = 19/57 (33.33%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 482 IVGRTGAGKSSMLNALFQFVKLERGEKSIEGCDVSKFGLTDLRKVLNYLTTITSSFS 652 ++GRTG+GKS++L A + + E GE I+G L RK + FS Sbjct: 1244 LLGRTGSGKSTLLAAFLRLLNTE-GEMQIDGVSWDSIPLQKWRKAFGVIPQKVFIFS 1299 HSP 3 Score: 23.483 bits (49), Expect = 9.107e-13 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 630 PQSPVLFPGNGRFNLDPFNE 689 PQ +F G R NLDP+ + Sbjct: 1292 PQKVFIFSGTFRKNLDPYGQ 1311 The following BLAST results are available for this feature:
BLAST of EY674957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674957 ID=EY674957; Name=EY674957; organism=Citrus sinensis; type=EST; length=1023bpback to top |