EY674894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM4 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=trpC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 4.975e-39 Identity = 83/165 (50.30%), Postives = 109/165 (66.06%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQK 564 AE+KKASPS+G++RE+FDP+EIA +Y+ GGA CLS+LTD+ +F+G FE L VR V PLLCKEFI+ +QIY AR GADAVLLIAA+L D D+ Y+ K+ LGLT LVEVHD E+ RV TF D+ TK++++ + I Q+ Sbjct: 83 AEIKKASPSKGVIRENFDPIEIALAYKLGGATCLSVLTDKSFFQGGFEVLVQVRKT-VDLPLLCKEFIIQPYQIYQARVAGADAVLLIAAILSDQDLLYLRKVAISLGLTILVEVHDSNELKRVLDLEGFPLVGINNRDLKTFNTDLRTTKEVVKEHKKRISEQE 246
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_GLOVI (Indole-3-glycerol phosphate synthase OS=Gloeobacter violaceus GN=trpC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 4.975e-39 Identity = 86/160 (53.75%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGE 549 AEVKKASPSRG+LR DFDPV +A++Y +GGA +S+LTDE +F+GSF NL +R V PLLCKEFI+ +QIY AR GADAVLLIAA+L D D+ Y+ ++ LG+ ALVEVHD E+DRV FEV + T+ LL ERGE Sbjct: 83 AEVKKASPSRGVLRSDFDPVALAQAYTRGGADAISVLTDEAFFQGSFTNLSRIREQ-VPLPLLCKEFILGPYQIYLARAHGADAVLLIAAILSDTDLAYLMRVADQLGMAALVEVHDLEELDRVLALEGVALVGINNRNLLDFEVHLETTETLLT-ERGE 240
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_SYNS9 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9902) GN=trpC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.498e-39 Identity = 80/161 (49.69%), Postives = 111/161 (68.94%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEI 552 AEVKKASPS+G++R+DFDPV IA++Y GGA+CLS+LTD+++F+G F+ L VR V PLLCKEF++ +Q++ AR GADAVLLIAA+L D D+RY+ K+ + LGL LVEVHD +E++RV TFE D++ T+ L+ R + Sbjct: 83 AEVKKASPSKGVIRDDFDPVAIAKAYAAGGASCLSVLTDKQFFQGGFDVLVQVRET-VDLPLLCKEFVLSPYQLFQARAAGADAVLLIAAILTDQDLRYLNKVAQSLGLDVLVEVHDAKELERVLAIGGFSLIGINNRDLATFETDLATTEVLVNQFRDRL 242
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_SYNPW (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain WH7803) GN=trpC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.469e-38 Identity = 81/155 (52.26%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLE 534 AEVKKASPS+G++REDFDPV IA++Y GGA+CLS+LTD +F+G F+ L AVR A V PLLCK+FI+ Q+Y AR GADA LLIAA+L D D+ Y+ K+ LGLT LVEVHD EM+R+ +FE D++ T+ L + Sbjct: 83 AEVKKASPSKGVIREDFDPVAIAKAYAAGGASCLSVLTDRTFFQGGFDVLVAVREA-VDLPLLCKDFILSPHQLYQARAAGADAALLIAAILTDQDLAYLQKVAATLGLTVLVEVHDAAEMERILTLGGFPLIGINNRDLTSFETDLATTEALTQ 236
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_CYAP4 (Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.469e-38 Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531 AEVKKASPS+G+LRE+FDPV IA++Y GAACLS+LTDEK+F+GSF L +R A V PLLCKEFI+ +Q+Y AR++GADAVLLIAA+L D D++Y KI LG+ AL+EVH E+DRV F VD+ T LL Sbjct: 82 AEVKKASPSKGVLREEFDPVAIAQAYATAGAACLSVLTDEKFFQGSFTYLNQIRQA-VHLPLLCKEFIIYPYQMYLARSQGADAVLLIAAILSDQDLQYFLKIATSLGMAALIEVHTLTELDRVLNLEGVSLVGINNRNLENFTVDLQTTCDLL 234
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_SYNPX (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain WH8102) GN=trpC PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 3.225e-38 Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLE 534 AEVKKASPS+G++REDFDPV IA +Y GGA CLS+LTD+ +F+G F+ L VR A V PLLCKEF++ +Q++ AR GADAVLLIAA+L D D++Y+ K LGL LVEVHD E++RV +FE D+S T++L+E Sbjct: 83 AEVKKASPSKGVIREDFDPVAIAEAYAAGGARCLSVLTDKTFFQGGFDVLVEVRQA-VDLPLLCKEFVLSPYQLFQARAAGADAVLLIAAILTDQDLQYLKKAAAALGLDVLVEVHDAAELERVLNLGGFPLIGINNRDLTSFETDLSTTEQLME 236
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_SYNR3 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain RCC307) GN=trpC PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.319e-38 Identity = 82/164 (50.00%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQ 561 AEVKKASPS+G++REDFDP IA++Y +GGA+CLS+LTD+++F+G FE L VR V PLLCKEFI+ +Q+Y AR GADAVLLIAA+L D DI Y+ K+ + LGL L+EVHD E++R +F+ D++ T + L GE +RQ Sbjct: 83 AEVKKASPSKGVIREDFDPEAIAKAYAEGGASCLSVLTDKRFFQGGFEVLVQVRQV-VDLPLLCKEFILSPYQLYQARAAGADAVLLIAAILTDQDISYLLKVARSLGLQVLLEVHDAAELERALGFEGVQLIGINNRDLTSFDTDLATT-ETLTATYGEQLRQ 244 HSP 2 Score: 21.557 bits (44), Expect = 7.319e-38 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 593 GLFTPDDIAYVQEAG 637 GLF+ DD+ VQ AG Sbjct: 254 GLFSRDDLDRVQSAG 268
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_SYNS3 (Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9311) GN=trpC PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 9.382e-38 Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQK 564 AEVKKASPS+G++REDFDPV IA++Y GGA+CLS+LTD+ +F+G F L VR A V PLLCK+FI+ +Q+Y AR GADA LLIAA+L D D+ Y K+ LGLT LVEVHD E+ RV +FE D++ T+ L +++ Q+ Sbjct: 83 AEVKKASPSKGVIREDFDPVAIAKAYASGGASCLSVLTDKAFFQGGFNVLIEVREA-VDLPLLCKDFILSPYQLYQARAAGADAALLIAAILTDQDLAYFAKVAAALGLTVLVEVHDAEELQRVLALGGFPLIGINNRDLTSFETDLATTETLTAQFAEQLLEQQ 246
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM5 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=trpC PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.090e-37 Identity = 77/154 (50.00%), Postives = 109/154 (70.78%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531 AE+KKASPS+G++REDF P EIA SYE+ GA+C+S+LTD+++F+GS+E L+ VR A PLLCK+FI+ A+QIY AR GADA+LLIAA+L D D+ Y+ KI LG++ LVEVHDE+E+ R+ TF+ D+ + +++ Sbjct: 83 AEIKKASPSKGVIREDFRPNEIAFSYERSGASCISVLTDKRFFQGSYEILQDVRGA-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLFYLKKIADNLGMSVLVEVHDEQELKRILSFKLFDLIGINNRDLKTFKTDLKTSIEMM 235
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM3 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=trpC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 6.081e-37 Identity = 79/153 (51.63%), Postives = 102/153 (66.67%), Query Frame = 1 Query: 70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKL 528 AEVKKASPS+G++R DFDPV IA +Y +GGA+CLS+LTD+ +F+G FE L VR V PLLCK+FI+ +Q+Y AR GADA LLI A+L D D+ Y++K+ LGLT LVEVHD E++RV TFE D+ T+ L Sbjct: 83 AEVKKASPSQGVIRADFDPVLIANAYAEGGASCLSVLTDKSFFQGGFEVLVEVRQT-VGLPLLCKDFILTPYQLYQARAAGADAALLIMAILSDQDLTYLSKVANSLGLTVLVEVHDAEELERVLNLGGFPLIGINNRDLTTFETDLETTETL 234 The following BLAST results are available for this feature:
BLAST of EY674894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 395
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674894 ID=EY674894; Name=EY674894; organism=Citrus sinensis; type=EST; length=1081bpback to top |