EY674894

Overview
NameEY674894
Unique NameEY674894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1081
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROMA (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus GN=trpC PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.943e-37
Identity = 79/153 (51.63%), Postives = 104/153 (67.97%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKL 528
            AE+KKASPSRG++REDF P +IA +Y+KGGA CLS+LTD+ +F+G F+ L  VR   +  PLLCK+FI+  +QIY AR  GADA+LLIAA+L D D+ Y+ KI   LGL+ LVEVHD  E++RV                 TFE D++ T K+
Sbjct:   83 AEIKKASPSRGLIREDFKPGDIAIAYQKGGATCLSVLTDKTFFQGGFDVLADVRKI-IDIPLLCKDFILHPYQIYQARASGADAILLIAAILSDQDLMYLNKIALSLGLSILVEVHDAAELNRVLRLGGFPLIGINNRDLKTFETDLTTTCKV 234          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROMT (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain NATL2A) GN=trpC PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.355e-36
Identity = 77/161 (47.83%), Postives = 108/161 (67.08%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEI 552
            +E+KKASPSRGI+REDFD   I + Y++GGA C+S+LTD+K+F+G F+ L  VR   +  P+LCK+FI+  +Q+Y AR  GADA LLIAA+L D D++Y++K+ + LGLT LVEVHD  E++RV                 +F+ D+  TKKL E    +I
Sbjct:   83 SEIKKASPSRGIIREDFDAKMIGKMYQEGGANCISVLTDKKFFQGGFDVLVEVRKE-IIIPILCKDFILYPYQLYQARAAGADAALLIAAILTDSDLKYLSKVAEHLGLTILVEVHDSEELERVLNINVFNLIGINNRNLKSFKTDLEVTKKLAENYANQI 242          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROMP (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpC PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.769e-36
Identity = 75/154 (48.70%), Postives = 108/154 (70.13%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531
            AE+KKASPS+G++REDF P EIA  YEK GA+C+S+LTD+++F+GS+E L+ VR+A    PLLCK+FI+ A+QIY AR  GADA+LLIAA+L D D+ Y+ KI   L ++ LVEVHD +E++R+                 TF+ D+  + +++
Sbjct:   83 AEIKKASPSKGVIREDFKPKEIASCYEKSGASCISVLTDKRFFQGSYEILQDVRTA-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLFYLKKIADNLKMSVLVEVHDGQELERILSLKSFNLIGINNRNLKTFKTDLKTSIRIM 235          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROMM (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpC PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.769e-36
Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKL 528
            AEVKKASPS+G++R DFDPV IA +Y +GGA+CLS+LTD+ +F+G FE L  VR   V  PLLCK+FI+  +Q+Y AR  GADA LLI A+L D D+ Y++K+   LGL  LVEVHD  E++RV                 TFE D+  T+ L
Sbjct:   83 AEVKKASPSQGVIRADFDPVLIANAYAEGGASCLSVLTDKSFFQGGFEVLVEVRQT-VGLPLLCKDFILTPYQLYQARAAGADAALLIVAILSDQDLTYLSKVANSLGLNVLVEVHDAEELERVLNLGGFPLIGINNRDLTTFETDLETTETL 234          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM1 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain NATL1A) GN=trpC PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.942e-36
Identity = 76/161 (47.20%), Postives = 108/161 (67.08%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEI 552
            +E+KKASPSRGI+REDFD   I + Y++GGA C+S+LTD+K+F+G F+ L  VR   +  P+LCK+FI+  +Q+Y AR  GADA LLIAA+L D D++Y++K+ + LGLT LVEVHD  E++RV                 +F+ D+  TKKL +    +I
Sbjct:   83 SEIKKASPSRGIIREDFDAKMIGKMYQEGGANCISVLTDKKFFQGGFDVLVEVRKE-IIIPILCKDFILYPYQLYQARAAGADAALLIAAILTDSDLKYLSKVAEHLGLTILVEVHDSEELERVLNINVFNLIGINNRNLKSFKTDLEVTKKLAKNYANQI 242          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROMS (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain AS9601) GN=trpC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.692e-35
Identity = 74/154 (48.05%), Postives = 106/154 (68.83%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531
            AE+KKASPS+G++R+DF+P  IA  YE  GA+C+S+LTD+K+F+GS+E LE VR +    PLLCK+FI+ A+QIY AR  GADA+LLIAA+L D D+ Y+ KI   L ++ LVEVH+  E++R+                 TF+ D+  +K+L+
Sbjct:   83 AEIKKASPSKGVIRKDFNPENIAICYEGLGASCISVLTDKKFFQGSYEILETVRKS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNSYELERILKLKSFNLIGINNRDLKTFKTDLKTSKELM 235          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM9 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=trpC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 9.709e-35
Identity = 72/154 (46.75%), Postives = 108/154 (70.13%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531
            AE+KKASPS+G++R+DF+P +IA  YE+ GA+C+S+LTD+++F+GS+E LE VR +    PLLCK+FI+ A+QIY AR  GADA+LLIAA+L D D+ Y+ KI   L ++ LVEVH++ E++R+                 TF+ D+  + +L+
Sbjct:   83 AEIKKASPSKGVIRKDFNPEDIAICYEELGASCISVLTDKRFFQGSYEILETVRKS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNDNELERILKLKSFNLIGINNRDLKTFKTDLKTSIELM 235          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM2 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=trpC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.163e-34
Identity = 72/154 (46.75%), Postives = 107/154 (69.48%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531
            AE+KKASPS+G++R+DF+P +IA  YE  GA+C+S+LTD+++F+GS+E LE VR +    PLLCK+FI+ A+QIY AR  GADA+LLIAA+L D D+ Y+ KI   L ++ LVEVH++ E++R+                 TF+ D+  + +L+
Sbjct:   83 AEIKKASPSKGVIRKDFNPKDIAICYEGLGASCISVLTDKRFFQGSYEILETVRKS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNDNELERILKLKSFNLIGINNRDLKTFKTDLKTSIELM 235          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PROM0 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9301) GN=trpC PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.831e-33
Identity = 72/154 (46.75%), Postives = 105/154 (68.18%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLL 531
            AE+KKASPS+G++R+DF+P  IA  YE  GA+C+S+LTD+++F+GS+E LE VR +    PLLCK+FI+ A+QIY AR  GADA+LLIAA+L D D+ Y+ KI   L ++ LVEVH+  E++R+                 TF+ D+  + +L+
Sbjct:   83 AEIKKASPSKGVIRKDFNPENIAICYEGLGASCISVLTDKRFFQGSYEILETVRRS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNADELERILKLKSFNLIGINNRDLKTFKTDLKTSIELM 235          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_NEIMF (Indole-3-glycerol phosphate synthase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=trpC PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.510e-32
Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEII 555
            AE+KKASPS+G++R DF P EIAR+YE  GAACLS+LTDE YF+GS E L+  R A V  P+L K+FI+D +Q+Y AR  GADAVLLIAA L    +     +   LG+T L+E+HDE E+++                  TFEV +  T  LL    G+ +
Sbjct:   58 AEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQGSPEYLKQAREA-VSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVAHELGMTVLLELHDESELEK-CRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTV 217          
The following BLAST results are available for this feature:
BLAST of EY674894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
TRPC_PROMA7.943e-3751.63Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROMT1.355e-3647.83Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROMP1.769e-3648.70Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROMM1.769e-3650.98Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROM13.942e-3647.20Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROMS5.692e-3548.05Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROM99.709e-3546.75Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROM22.163e-3446.75Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_PROM01.831e-3346.75Indole-3-glycerol phosphate synthase OS=Prochloroc... [more]
TRPC_NEIMF4.510e-3246.91Indole-3-glycerol phosphate synthase OS=Neisseria ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674894 ID=EY674894; Name=EY674894; organism=Citrus sinensis; type=EST; length=1081bp
CGGGCGGGTACGGGTCCGGGAATTCCGGGTCGACCCCGCGTCCGCGGACG
CGTGGGCGGCCCCTTGGGTGCTGAAGTAAAGAAGGCTTCTCCGAGCAGAG
GAATCCTAAGAGAGGATTTTGATCCAGTTGAAATTGCCCGATCTTATGAG
AAAGGTGGAGCAGCATGTCTCAGTATTTTGACAGATGAAAAGTATTTTAA
GGGAAGCTTTGAAAACTTGGAGGCTGTAAGGAGTGCAGGAGTGAAGTGCC
CCCTATTGTGCAAAGAATTCATTGTAGACGCATGGCAGATCTACTATGCC
CGAACTAAAGGTGCAGATGCAGTTCTTCTGATCGCTGCTGTTTTGCCTGA
TCTTGATATCAGATACATGACTAAGATCTGCAAGATGCTTGGTTTGACTG
CACTTGTTGAGGTTCATGACGAGAGGGAAATGGATCGTGTTCTTGGAATT
GAGGGGATTGAACTTATTGGTATTAACAATCGGAACCTTGAGACGTTTGA
GGTTGATATTAGTAACACAAAGAAACTTCTTGAAGGAGAGCGTGGTGAAA
TAATCCGTCAAAAGAAACATAATTGTGGTTGGGTGAATCTGGGGCTTATT
TACTCCCGATGATATCGCATACGTACAAGAAGCTGGGTGTTAAAGCTGTT
CTGGGTGGGGGAGTCCAATAGGGGAAACAAGACGACCCCCGGGAAGGGAA
ATAACGGGAATTTTTTGGAAAAAAAAAATTTCCTGGAATGACCCCCCTAT
TTTTTTGGGTTTCCCACAAAAGGGTCCGGGGGGAAAGGTATTTTCAAATA
GGAAAAAAAAAAAAAAAGCCCCCCTTTTTGGTTTCCAATAAAATATAAAT
TAAAGCCCCCCCCCCCCTTAATGGTGTTTTCTTATACGCCCCTTTTTTTC
CCCTTTTTTCCCTTTTTTGTATTTTTTTGGGATAACTTTTTCCCCCAAAA
GGGGAGAAAAGGGGAAAAAAAAATGTGGGTTTTTGTGGAATCCCTGAAAA
AAGGGAAATGAGGGGGGGTAATGTTGGGTTGGTGGTGGGGGGGAGATTAG
GAAGAAAAATAAATATAATTAAAAAAAAAAA
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