EY674894

Overview
NameEY674894
Unique NameEY674894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1081
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPG_CRYNV (Anthranilate synthase component 2 OS=Cryptococcus neoformans var. grubii GN=TRP1 PE=4 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 3.590e-13
Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP----LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREM 432
            AE+K+ASPS+G +       + A  Y   GA+ +S+LT+  +FKGS  ++ AVR+A    P    +L K+F++  + I  AR  GAD VLLI A+L    ++ +      LG+  LVEV++  E+
Sbjct:  286 AEIKRASPSKGDIAPTASAPQQALKYALAGASVISVLTEPTWFKGSLLDMLAVRNAVDSLPNRPAILRKDFVLSKYMIDEARLYGADTVLLIVAMLEPQQLKELYDYSVSLGMEPLVEVNNPTEL 410          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_HALVO (Indole-3-glycerol phosphate synthase OS=Halobacterium volcanii GN=trpC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.124e-13
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREM 432
            AEVK  SP+   +RED DPVE+AR    GGA  LS+LT+ ++F GS E+L  +R A V  P+L K+FI++  Q+   +   +D VLLIA  + + D+  + +  +  G   LVEVH   E+
Sbjct:   53 AEVKPTSPTTEGVRED-DPVELAREMVAGGATALSVLTEPEHFGGSAESLRRIREA-VDVPVLRKDFIMNEAQLDVVQ---SDLVLLIARFVGE-DLPALVEAARDRGFQPLVEVHTREEL 167          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_HALSA (Indole-3-glycerol phosphate synthase OS=Halobacterium salinarium GN=trpC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.124e-13
Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREMDR 438
            AEVK  SP+        DP E+AR    GGAA +S+LT+  +F GS + L A+R A V  P+L K+F++   Q+       ADAVLLIA  L D D+  M    +  G  ALVEVH  RE+ R
Sbjct:   52 AEVKPTSPTTDT-EHSGDPAELAREMVAGGAAAVSVLTEPHHFDGSTDALRAIRDA-VDVPVLRKDFLLTEPQL---DAVAADAVLLIARFLGD-DLGDMLAAARDRGFQALVEVHSPRELAR 168          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPG_PICAN (Anthranilate synthase component 2 (Fragment) OS=Pichia angusta PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.327e-12
Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLE----AVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 345
            +E+K+ASPS+G++  D +  + A +Y K G A +S+LT+  +FKG+ ++LE    A+ S   +  +L KEFI + +QI  AR  GAD VLLI  +L
Sbjct:  271 SEIKRASPSKGVIDGDANAAKQALNYAKAGVATISVLTEPTWFKGNIQDLEVARKAIDSVANRPCILRKEFIFNKYQILEARLAGADTVLLIVKML 366          
BLAST of EY674894 vs. ExPASy Swiss-Prot
Match: TRPC_PYRAB (Indole-3-glycerol phosphate synthase OS=Pyrococcus abyssi GN=trpC PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.508e-11
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   70 AEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKMLGLTALVEVHDEREM 432
            AE+K  SP  G L    DP+EI R YE+ GA  +S +TD KYF+G+F+  + +     + P+L K+FI    +I      G  AVLLI  +L D  +       +  GL  LVEVH   E+
Sbjct:   20 AELKVYSPKYGDLLRGRDPLEILRRYERAGAVGISYITDPKYFRGNFDFFKRL-CKETELPVLRKDFITTKEEIEKTAEAGGSAVLLITRLLKD-KLPEFVDHAREHGLDTLVEVHTLEEL 138          
The following BLAST results are available for this feature:
BLAST of EY674894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
TRPG_CRYNV3.590e-1336.80Anthranilate synthase component 2 OS=Cryptococcus ... [more]
TRPC_HALVO6.124e-1341.32Indole-3-glycerol phosphate synthase OS=Halobacter... [more]
TRPC_HALSA6.124e-1343.09Indole-3-glycerol phosphate synthase OS=Halobacter... [more]
TRPG_PICAN2.327e-1241.67Anthranilate synthase component 2 (Fragment) OS=Pi... [more]
TRPC_PYRAB1.508e-1138.02Indole-3-glycerol phosphate synthase OS=Pyrococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674894 ID=EY674894; Name=EY674894; organism=Citrus sinensis; type=EST; length=1081bp
CGGGCGGGTACGGGTCCGGGAATTCCGGGTCGACCCCGCGTCCGCGGACG
CGTGGGCGGCCCCTTGGGTGCTGAAGTAAAGAAGGCTTCTCCGAGCAGAG
GAATCCTAAGAGAGGATTTTGATCCAGTTGAAATTGCCCGATCTTATGAG
AAAGGTGGAGCAGCATGTCTCAGTATTTTGACAGATGAAAAGTATTTTAA
GGGAAGCTTTGAAAACTTGGAGGCTGTAAGGAGTGCAGGAGTGAAGTGCC
CCCTATTGTGCAAAGAATTCATTGTAGACGCATGGCAGATCTACTATGCC
CGAACTAAAGGTGCAGATGCAGTTCTTCTGATCGCTGCTGTTTTGCCTGA
TCTTGATATCAGATACATGACTAAGATCTGCAAGATGCTTGGTTTGACTG
CACTTGTTGAGGTTCATGACGAGAGGGAAATGGATCGTGTTCTTGGAATT
GAGGGGATTGAACTTATTGGTATTAACAATCGGAACCTTGAGACGTTTGA
GGTTGATATTAGTAACACAAAGAAACTTCTTGAAGGAGAGCGTGGTGAAA
TAATCCGTCAAAAGAAACATAATTGTGGTTGGGTGAATCTGGGGCTTATT
TACTCCCGATGATATCGCATACGTACAAGAAGCTGGGTGTTAAAGCTGTT
CTGGGTGGGGGAGTCCAATAGGGGAAACAAGACGACCCCCGGGAAGGGAA
ATAACGGGAATTTTTTGGAAAAAAAAAATTTCCTGGAATGACCCCCCTAT
TTTTTTGGGTTTCCCACAAAAGGGTCCGGGGGGAAAGGTATTTTCAAATA
GGAAAAAAAAAAAAAAAGCCCCCCTTTTTGGTTTCCAATAAAATATAAAT
TAAAGCCCCCCCCCCCCTTAATGGTGTTTTCTTATACGCCCCTTTTTTTC
CCCTTTTTTCCCTTTTTTGTATTTTTTTGGGATAACTTTTTCCCCCAAAA
GGGGAGAAAAGGGGAAAAAAAAATGTGGGTTTTTGTGGAATCCCTGAAAA
AAGGGAAATGAGGGGGGGTAATGTTGGGTTGGTGGTGGGGGGGAGATTAG
GAAGAAAAATAAATATAATTAAAAAAAAAAA
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