EY674887

Overview
NameEY674887
Unique NameEY674887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674887 vs. ExPASy Swiss-Prot
Match: NOG2_CRYNV (Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var. grubii GN=NOG2 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.119e-23
Identity = 80/219 (36.53%), Postives = 112/219 (51.14%), Query Frame = 2
Query:   29 SRSASTVRRLNMYKTRPKRDRKGKVLQHE-FQS--KELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA--RVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAERK*GRWI*GTCSA*N------------XXXXXXXXXIWGELYKV*ESSEGLLSRFWEA*DPPGAK 634
            ++SAS V+ LN  K    RDR GK+++   FQ   KE    R++PDRRWFGNTR ++Q  L+ FR  L+   +  Y+V+L+  KLP  LL D  K    R H+++TEPF + FGPK +RKRP+L     E L + +  S  A      A T+     G    GT    +                     IWGELYKV +SS+ ++    +A DP G +
Sbjct:   43 AKSASRVKMLNGGKA--VRDRDGKIVEAAAFQKGEKEAEPGRVKPDRRWFGNTRVISQSALDHFRTALKEQKADPYSVLLKRNKLPMGLLQDDTKDGGRRPHIVETEPFGNTFGPKAQRKRPRLDIGSIEELGESSAASAAAAA----AETATAESQGN---GTADLADIYHPTTSTAREPIYAKGTSRRIWGELYKVLDSSD-VVIHVLDARDPLGTR 251          
BLAST of EY674887 vs. ExPASy Swiss-Prot
Match: NOG2_NEUCR (Nucleolar GTP-binding protein 2 OS=Neurospora crassa GN=nog-2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.701e-22
Identity = 73/240 (30.42%), Postives = 118/240 (49.17%), Query Frame = 2
Query:    8 RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA-RVH----LLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFE------------------------QKNDASTSAERK*GRWI*GTCSA*NXXXXXXXXXIWGELYKV*ESSEGLLSRFWEA*DPPGAK 634
            +  G++  RSA  ++ LN+ K  +  R+++GKV++   +QS+++P   I+P+RRWF NTR ++Q  L  FRE +       Y+V+L+  KLP SL+ D  K A + H     +++EPF   FGPK +RKRPKL  +    L + ++ S D ++                        Q+ D S +  ++                      IW ELYKV +SS+ +L    +A DP G +
Sbjct:   22 KVKGENFYRSAKKIKALNVLKEGKAIRNKEGKVVKAASYQSRDVPTAVIEPNRRWFNNTRVISQDTLTSFREAIAEKDKDPYSVLLKSNKLPMSLIRDGPKDALKKHQAKMTIESEPFSQTFGPKAQRKRPKLSFNTIGDLTEHSEKSMDTYQARLEEIKLLSGASGYGGGLADDDVQEEDFSVATAKE------------AIFTKGQSKRIWNELYKVIDSSDVIL-HVIDARDPLGTR 248          
The following BLAST results are available for this feature:
BLAST of EY674887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NOG2_CRYNV1.119e-2336.53Nucleolar GTP-binding protein 2 OS=Cryptococcus ne... [more]
NOG2_NEUCR4.701e-2230.42Nucleolar GTP-binding protein 2 OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-G01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674887 ID=EY674887; Name=EY674887; organism=Citrus sinensis; type=EST; length=968bp
CGCGAATCGTACGGACGGGAAAAGCGGTAGCCGAAGTGCGTCGACAGTAC
GCCGCCTCAATATGTACAAGACAAGGCCGAAACGCGACCGTAAGGGCAAA
GTTTTGCAGCACGAGTTTCAGTCGAAGGAGTTGCCCAACACTCGCATTCA
GCCAGACCGCCGCTGGTTCGGGAACACACGTTGTGTGAATCAGAAGCAGC
TCGAATTCTTTCGTGAAGAGCTACAGAGCCATATGTCTAGTAGCTATAAT
GTTATCTTGAGAGAGAAAAAACTGCCCTTTTCTCTCCTAAATGATCACCA
GAAGCAAGCTAGAGTTCACCTCCTTGATACCGAGCCTTTTCAAGATGCCT
TTGGACCTAAGGGAAAGAGGAAGAGGCCAAAGCTATTGGCATCAGATTAC
GAATCTTTAGTTAAGAGAGCTGATGGTTCTCAAGATGCCTTTGAGCAGAA
GAATGATGCTAGTACATCAGCCGAAAGGAAGTGAGGGAGATGGATTTAGG
GGACTTGTTCGGCATAAAATGTTTGAAAAAGGGTCAAAGTAAAACGTATA
TGGGGAGAACTGTACAAAGTATAAGAATCGTCCGAAGGTTTGTTGTCCAG
GTTTTGGGAGGCTTGAGACCCTCCAGGGGCAAAGAAGGCCCTCCATCCTG
GAAAGGCATCCAAAAAAAAGCATGTGCAAAAATTAACCCCTGGAATTCTC
CGGGTTAAAACAGGGCGAATACTTGTTTCCCCCCCGGGGCCTAAAAAAGG
GGGGGGTTTATAAATTTTATCCAAAGGAAATTTTCCAATTTTTTTCCTTT
TTCCGAGGTTGCCAAGCAAAAAATATTTTTTTTTTGGTGGAGGGGGTGTT
CCCATTTTTTTATTGGGGGCGGTGTAAAAATATTTTTCTCCCCGGTTTGG
GAAAAGAAGGGGGAAACACAAAGAGGACCCAAAAATCTGTCGGTGTGGTG
TTGTTTGTGTGGTGGGGT
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