EY674884

Overview
NameEY674884
Unique NameEY674884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1029
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.154e-28
Identity = 64/138 (46.38%), Postives = 89/138 (64.49%), Query Frame = 1
Query:   97 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + + DFCVAD        G+ C  PA +T +DF FSGL +AGNT++   +AVT   VAQ   +N LG+SLAR+D A  G+ P H HP A+EIL ++ G +  GF++S+  N ++ K L KGD+ +FPQGL+HF  N G
Sbjct:   25 SQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYG 162          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.813e-28
Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            ++ D CVADL  +    G+ C   A VT DDF F GL  AGNT +   + VT A V + P +N LG+S++R+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN +Y KT+  GD+ +FP+GLLHF  N+G
Sbjct:   30 LLQDICVADLTSAVKVNGFAC--KAAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFI-TTANKLYTKTISAGDVFVFPRGLLHFQKNNG 162          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.813e-28
Identity = 67/138 (48.55%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSGCG 513
            M+ D CVADL       G+PC   A VTADDF F+GL   GNT +   + VT A V  FP VN LG+S+AR+D A GG  P HTHP A+EI+ V+ G +  GFI ++AN ++ KT+  G++ +FP+GL+HF  N G G
Sbjct:   29 MLQDVCVADLASPVKLNGFPC--KANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFI-TTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHG 163          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.184e-28
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            M+ D CVAD K    P    G PC     VTA+DF F GL  AGNTT+ + + VT A V + P +N +G+S+AR+D A  G+ P HTHP A+EI+ V  G +  GF+ ++AN ++ +T+ KG++ +FP+GL+HF  NSG
Sbjct:   27 MLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFV-TTANKLFTRTVSKGEVFVFPRGLVHFQRNSG 164          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.069e-27
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            M+ D CVAD K    P    G+PC     VTA+DF F GL  AGNT + + + VT A V   P +N +G+S+AR+D A  G+ P HTHP A+EI+ VV G +  GF+ ++AN ++ +T+ KG++ +FP+GL+HF  N+G
Sbjct:   27 MLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFV-TTANKLFTRTVCKGEVFVFPRGLVHFQKNNG 164          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.396e-27
Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGF-ISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            ++ DFCV D        G+PC     V A DF FSGL +AGNTT+   + VT   VAQ P +N +G+SL R+D A  G+ P HTHP A+EI  V+ G +  GF IS+  N ++ K L KGD+ +FPQGL+HF  N+G
Sbjct:   33 LLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNG 169          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.305e-27
Identity = 64/136 (47.06%), Postives = 87/136 (63.97%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + D CVAD   +    G  C     V A+DF FSGL +AGNTT+   +AVT   VAQ P +N LG+SLAR+D A  G+ P HTHP A+EIL V+ G +  GF++S+  N ++ K + KGD+ +FP+GL+HF  N G
Sbjct:   34 LQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYG 169          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.182e-26
Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1
Query:   97 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVF-SGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + + DFCVAD   +    G+ C  P  VTA+DF     LGV GNT +   +AVTP  V + P +N LG+S AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N  + K L  GD+ +FPQGL+HF +N+G
Sbjct:   31 SQLQDFCVADKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNG 172          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.706e-25
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  103 VNDFCVA------DLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            V DFCVA      D   +  PA  G+PC P + V +DDF F+GL VA +T +     VT A    FP +N LG+S+ R+DLA GGV P+H+HP A+E++ VV G + AGF+ S+A   Y K L +G+  + P+G++HF  N G
Sbjct:   30 VQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFV-STAGEFYSKVLGEGETFVVPRGMIHFQYNVG 171          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.229e-25
Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            M+ D CVADL       G+PC   A VT+ DF   GL   G T +   A VT A V   P +N LG+SL+R+D A GG+ P HTHP A+E++ V+ G +  GF+ ++AN +  ++L KGD+  FP+GL+HF  N+G
Sbjct:   27 MLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL-TTANKLISQSLKKGDVFAFPKGLVHFQKNNG 161          
The following BLAST results are available for this feature:
BLAST of EY674884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL21_ORYSJ2.154e-2846.38Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL52_ORYSJ2.813e-2846.32Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL11_ORYSJ2.813e-2848.55Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ8.184e-2845.32Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL13_ORYSJ1.069e-2744.60Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL22_ORYSJ1.396e-2746.72Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL23_ORYSJ5.305e-2747.06Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL41_ORYSJ1.182e-2644.37Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ1.706e-2544.06Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL21_ARATH2.229e-2544.12Germin-like protein subfamily 2 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674884 ID=EY674884; Name=EY674884; organism=Citrus sinensis; type=EST; length=1029bp
GGACCGGGGTCCGGGATTTCCCGGGGTCGACCCACGCGTCCGAAAATGCT
TCACATTCTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTA
TGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCC
GGCTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATT
TTCGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAG
TGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTC
TCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACAC
TCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTG
CCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTTAA
AAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCCAGTAAA
TTCCGGGTGCGGACGGAGCCCTCCGTTTTGTTACCTTCAACAGCCCGAAT
CCTGGACTCCAAATCACCGATTTCCCCTTATTTTGCTAACAATTGTTCTT
CCCAATTGGGTGGAACCAGACCACTTTTCCTGGACAAGGCCTACGGGGAA
AGAGGGCTTCAAGGGTTATCCCCTGGGTGGCACCCGGCCTAGGCCTTAAT
TTAATTACCCACTTTCTTTCCTTTTGGAGTTTTTGAAGTTTTTTATAATT
TTTCTTTTTATTTTGCCAAAGGGTTTTTTTTATTGTTGGGGAATTCCCAA
GAATTAAATATTTTTCCCTGTGTTCCCCCCCCTTTCCCCCCCTATTCTTT
TTTTTCTCTTGACGAAAAAAAAAAAAAATTTTCTCTCCCCCTTTTTTTAC
AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGCGCCCCGC
CCTTCCTCTAAAAAGGGAGAGATCCCCTACAAGGGCGACTTTTTCACCGC
AGATCCCCGCCTGTGGGGGGGGGTCTAGT
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