EY674884

Overview
NameEY674884
Unique NameEY674884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1029
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.911e-25
Identity = 61/135 (45.19%), Postives = 88/135 (65.19%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCV DLK S S  G+PC   + V+A DF FSGLG   NT++    AV+PA V  FP +N LGLS+  ++ A GGV P H+HP A+E  +V+ G +  GF++++ NT++ K L  G++ + P+GL+HF  N G
Sbjct:   33 LQDFCVGDLKASPSINGFPC--KSSVSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTN-NTLFSKVLNAGEMFVVPRGLVHFQWNVG 164          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.911e-25
Identity = 60/139 (43.17%), Postives = 89/139 (64.03%), Query Frame = 1
Query:  103 VNDFCVADLKLSD--SPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA  +     SPA  G+PC P + V +DDF F+GL  AG+T +   A++ P  V  FPA+N LG+++ R+DLA GGV P+H+HP A+E++ V+ G +  GF+ S+A   Y K + +G+    P+GL+HF  N G
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV-STAGKYYSKVVGEGETFAIPRGLMHFQYNPG 177          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.965e-25
Identity = 55/134 (41.04%), Postives = 86/134 (64.18%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNS 504
            + D CVAD        G+ C P + +TA DF F+G+G      + + +AVT A V +   +N LG+SLAR+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN ++ KT+ KG++ +FP+GL+H+  N+
Sbjct:   27 LQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFI-TTANKLFAKTVKKGEVFVFPRGLIHYQKNN 159          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.965e-25
Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            M+ DFCVADL       GYPC  PA VT +DF F GL  A  T  S + +AVT A V + P +N LG+S++R+D A GG+ P H HP ASE + V+ G +  GF++++   +  K + KGD+ +FP+ LLHF  N
Sbjct:   26 MLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLI-SKHVNKGDVFVFPKALLHFQQN 159          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.965e-25
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVA  + +     G  C  P  VTA+DF +SGL +A NTT+ + + VT   V + P +N LG+SLARLD A+GG  P H HP A+EIL+V  G +  GF+SS+   N ++ K L +GD+ +FP GL+HF +N
Sbjct:   31 LQDFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMN 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.445e-24
Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  103 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA  DLK      G  C  P    A+DF FSGL  AG+T + + + VT   V Q P +N +G+SL R+D A  G  P HTHP A+EIL+++ G +  GF+SS+   N ++ K L  GD+ +FP G++HF VN G
Sbjct:   28 LQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIG 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.887e-24
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  103 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA  DLK      G  C  P    A+DF +SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HF VN G
Sbjct:   28 LQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.464e-24
Identity = 62/141 (43.97%), Postives = 86/141 (60.99%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPA----GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA   + D+      G  C  P  V A+DF  SGL +AGNT + + + VT   V + P +N LG+SL R+D A GG  P HTHP A+EIL+VV G +  GF++S+   N ++ K L  GD+ +FP G++HF VN G
Sbjct:   30 LQDFCVA---VDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVG 167          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.464e-24
Identity = 64/139 (46.04%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  103 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HF VN G
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVG 165          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.218e-24
Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  103 VNDFCVADLKLSDS--PAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCV   K +D     G  C  P  V  DDF+F GL +  NT + +  A T    A  P +N LG+S+ARLD A  G+ P HTHP A+E+ +V+ G    GF++S+     N ++ K L KGD+ +FPQGL+HF +N G
Sbjct:   28 LQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIG 168          
The following BLAST results are available for this feature:
BLAST of EY674884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLT2_ARATH2.911e-2545.19Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL37_ORYSJ2.911e-2543.17Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL24_ARATH4.965e-2541.04Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL23_ARATH4.965e-2545.19Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL16_ARATH4.965e-2545.59Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL113_ARATH1.445e-2443.88Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH1.887e-2444.60Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL17_ARATH2.464e-2443.97Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL120_ARATH2.464e-2446.04Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GLP1_MESCR3.218e-2441.84Germin-like protein OS=Mesembryanthemum crystallin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674884 ID=EY674884; Name=EY674884; organism=Citrus sinensis; type=EST; length=1029bp
GGACCGGGGTCCGGGATTTCCCGGGGTCGACCCACGCGTCCGAAAATGCT
TCACATTCTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTA
TGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCC
GGCTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATT
TTCGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAG
TGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTC
TCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACAC
TCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTG
CCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTTAA
AAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCCAGTAAA
TTCCGGGTGCGGACGGAGCCCTCCGTTTTGTTACCTTCAACAGCCCGAAT
CCTGGACTCCAAATCACCGATTTCCCCTTATTTTGCTAACAATTGTTCTT
CCCAATTGGGTGGAACCAGACCACTTTTCCTGGACAAGGCCTACGGGGAA
AGAGGGCTTCAAGGGTTATCCCCTGGGTGGCACCCGGCCTAGGCCTTAAT
TTAATTACCCACTTTCTTTCCTTTTGGAGTTTTTGAAGTTTTTTATAATT
TTTCTTTTTATTTTGCCAAAGGGTTTTTTTTATTGTTGGGGAATTCCCAA
GAATTAAATATTTTTCCCTGTGTTCCCCCCCCTTTCCCCCCCTATTCTTT
TTTTTCTCTTGACGAAAAAAAAAAAAAATTTTCTCTCCCCCTTTTTTTAC
AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGCGCCCCGC
CCTTCCTCTAAAAAGGGAGAGATCCCCTACAAGGGCGACTTTTTCACCGC
AGATCCCCGCCTGTGGGGGGGGGTCTAGT
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