EY674884

Overview
NameEY674884
Unique NameEY674884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1029
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.558e-23
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            M+ D CVADL       G+PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI ++AN +  K + KG++ +FP+GL+HF  N+G
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFI-TTANVLVSKKIIKGEVFVFPRGLVHFQKNNG 169          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.558e-23
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            M+ D CVADL  +    GY C     +T +DF F GL     T +   + VT A V + P +N LGLS++R+D A  G+ P H HP ASEI+ V+ G +  GF+ ++A  +  K L KGD+  FP+GL+HF  N
Sbjct:   24 MLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFV-TTAGKLIAKNLNKGDVFTFPKGLIHFQKN 156          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.647e-23
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 1
Query:  100 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            M+ D CVADL       G+PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI ++AN +  K + KG++ +FP+GL+HF  N+G
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFI-TTANVLVSKQITKGEVFVFPRGLVHFQKNNG 169          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 4.647e-23
Identity = 61/139 (43.88%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS--ANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCV     +D     G  C  P +V ADDF FS L   GNT + + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GFISS+   N ++ KTL  GD+ +FP+GL+HF  N G
Sbjct:   30 LQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLG 168          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.927e-23
Identity = 56/135 (41.48%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + D CVAD        G+ C P + VTA+DF  + L   G T +   + VT A V + P +N LG+S+AR+D A GG+ P HTHP A+E++ V+ G +  GFI+++ N +  KT+ KG+  +FP+GL+HF  N+G
Sbjct:   26 LQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTT-NQLIAKTIAKGETFVFPKGLVHFQKNNG 159          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.927e-23
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HF  N
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFN 161          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.927e-23
Identity = 54/134 (40.30%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVAD+K      G+PC  P  V +DDF  +    +  +T + + + VT   V  FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD  +FP+ ++HF +N
Sbjct:   29 LQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMN 162          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.035e-22
Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HF  N
Sbjct:   28 LQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFN 161          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.035e-22
Identity = 61/139 (43.88%), Postives = 81/139 (58.27%), Query Frame = 1
Query:  103 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HF VN G
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 165          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.035e-22
Identity = 61/139 (43.88%), Postives = 81/139 (58.27%), Query Frame = 1
Query:  103 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HF VN G
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 165          
The following BLAST results are available for this feature:
BLAST of EY674884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
NEC1_NICLS3.558e-2343.38Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL25_ARATH3.558e-2341.79Probable germin-like protein subfamily 2 member 5 ... [more]
NEC1_NICPL4.647e-2343.38Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL18_ARATH4.647e-2343.88Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
RHRE_PEA7.927e-2341.48Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL88_ORYSJ7.927e-2342.54Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL84_ORYSJ7.927e-2340.30Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ1.035e-2241.79Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL119_ARATH1.035e-2243.88Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL117_ARATH1.035e-2243.88Germin-like protein subfamily 1 member 17 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674884 ID=EY674884; Name=EY674884; organism=Citrus sinensis; type=EST; length=1029bp
GGACCGGGGTCCGGGATTTCCCGGGGTCGACCCACGCGTCCGAAAATGCT
TCACATTCTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTA
TGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCC
GGCTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATT
TTCGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAG
TGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTC
TCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACAC
TCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTG
CCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTTAA
AAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCCAGTAAA
TTCCGGGTGCGGACGGAGCCCTCCGTTTTGTTACCTTCAACAGCCCGAAT
CCTGGACTCCAAATCACCGATTTCCCCTTATTTTGCTAACAATTGTTCTT
CCCAATTGGGTGGAACCAGACCACTTTTCCTGGACAAGGCCTACGGGGAA
AGAGGGCTTCAAGGGTTATCCCCTGGGTGGCACCCGGCCTAGGCCTTAAT
TTAATTACCCACTTTCTTTCCTTTTGGAGTTTTTGAAGTTTTTTATAATT
TTTCTTTTTATTTTGCCAAAGGGTTTTTTTTATTGTTGGGGAATTCCCAA
GAATTAAATATTTTTCCCTGTGTTCCCCCCCCTTTCCCCCCCTATTCTTT
TTTTTCTCTTGACGAAAAAAAAAAAAAATTTTCTCTCCCCCTTTTTTTAC
AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGCGCCCCGC
CCTTCCTCTAAAAAGGGAGAGATCCCCTACAAGGGCGACTTTTTCACCGC
AGATCCCCGCCTGTGGGGGGGGGTCTAGT
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