EY674884

Overview
NameEY674884
Unique NameEY674884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1029
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.281e-20
Identity = 58/139 (41.73%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVAD        G+PC     V  DDF  +  L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HF  N
Sbjct:   28 LQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFN 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.071e-19
Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVF-SGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVAD        G+PC     V  DDF   + L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V  G +  GF++S+     N ++ KTL KGD+ +FPQGL+HF  N
Sbjct:   28 LQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFN 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.071e-19
Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  103 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + +  G+  + P+GL+HF  N G
Sbjct:   29 LQDFCVADLDGKAVSVNGHTCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVG 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.399e-19
Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  103 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + +  G+  + P+GL+HF  N G
Sbjct:    6 LQDFCVADLDGKAVSVNGHTCKPMSEA-GDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVG 143          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.399e-19
Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  103 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + +  G+  + P+GL+HF  N G
Sbjct:   29 LQDFCVADLDGKAVSVNGHMCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVG 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.317e-19
Identity = 55/139 (39.57%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVADL    +  GYPC  P     D+F+FS  L   G+  +  N + VT   VA +P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I S  + N  Y + +  G+  + P+GL+HF  N G
Sbjct:   32 LQDFCVADLDSEVTLNGYPC-KPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVG 169          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.317e-19
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  151 GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTL*KGDIMIFPQGLLHFPVNSGCGRSPPFCYL 537
            G+ C  P+ + A DF    L  AG+  +++ ++       +FP +N LG+S+AR D+A  G +  H+HP ASE++ V  G + AGF  +    ++ KTL +GD+ IFP+GL+HF +N G G +  F  L
Sbjct:   46 GFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGK-LFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVL 173          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 9.069e-19
Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + DFCVAD        G PC     V+ DDF  +  L    +TT S   + VT   V +   +N L +S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HF  N
Sbjct:   28 LQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFN 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 9.069e-19
Identity = 54/146 (36.99%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG---------LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTL*KGDIMIFPQGLLHFPVN 501
            + D CVAD        G+PC     V+ DDF  +             AG+  ++IN       V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FP+GL+HF  N
Sbjct:   28 LQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLIN-------VMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFN 166          
BLAST of EY674884 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.547e-18
Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  103 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTL*KGDIMIFPQGLLHFPVNSG 507
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++P VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K +  G+  + P+GL+HF  N G
Sbjct:   32 LQDFCVADLNSEVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVG 169          
The following BLAST results are available for this feature:
BLAST of EY674884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL122_ORYSJ6.281e-2041.73Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL121_ORYSJ1.071e-1941.73Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GER2_WHEAT1.071e-1941.73Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
OXO1_HORVU1.399e-1941.73Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GER3_WHEAT1.399e-1941.73Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL33_ORYSJ5.317e-1939.57Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL111_ORYSJ5.317e-1937.21Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL124_ORYSJ9.069e-1941.01Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL123_ORYSJ9.069e-1936.99Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL35_ORYSJ1.547e-1838.13Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674884 ID=EY674884; Name=EY674884; organism=Citrus sinensis; type=EST; length=1029bp
GGACCGGGGTCCGGGATTTCCCGGGGTCGACCCACGCGTCCGAAAATGCT
TCACATTCTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTA
TGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCC
GGCTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATT
TTCGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAG
TGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGGCTCGGACTC
TCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACAC
TCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTG
CCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTTAA
AAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCCAGTAAA
TTCCGGGTGCGGACGGAGCCCTCCGTTTTGTTACCTTCAACAGCCCGAAT
CCTGGACTCCAAATCACCGATTTCCCCTTATTTTGCTAACAATTGTTCTT
CCCAATTGGGTGGAACCAGACCACTTTTCCTGGACAAGGCCTACGGGGAA
AGAGGGCTTCAAGGGTTATCCCCTGGGTGGCACCCGGCCTAGGCCTTAAT
TTAATTACCCACTTTCTTTCCTTTTGGAGTTTTTGAAGTTTTTTATAATT
TTTCTTTTTATTTTGCCAAAGGGTTTTTTTTATTGTTGGGGAATTCCCAA
GAATTAAATATTTTTCCCTGTGTTCCCCCCCCTTTCCCCCCCTATTCTTT
TTTTTCTCTTGACGAAAAAAAAAAAAAATTTTCTCTCCCCCTTTTTTTAC
AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGCGCCCCGC
CCTTCCTCTAAAAAGGGAGAGATCCCCTACAAGGGCGACTTTTTCACCGC
AGATCCCCGCCTGTGGGGGGGGGTCTAGT
back to top