EY674878

Overview
NameEY674878
Unique NameEY674878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC2_HUMAN (Ras-related C3 botulinum toxin substrate 2 OS=Homo sapiens GN=RAC2 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.366e-45
Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +   VNLGLWDTAGQEDY+RLRPLSY   D+F++ FSLVS ASYENV  KW PE++H+ P  P++LVGTKLDL
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC2_BOVIN (Ras-related C3 botulinum toxin substrate 2 OS=Bos taurus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.366e-45
Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +   VNLGLWDTAGQEDY+RLRPLSY   D+F++ FSLVS ASYENV  KW PE++H+ P  P++LVGTKLDL
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC3_MOUSE (Ras-related C3 botulinum toxin substrate 3 OS=Mus musculus GN=Rac3 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.086e-44
Identity = 82/116 (70.69%), Postives = 98/116 (84.48%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   D+F++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDL
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDL 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC3_HUMAN (Ras-related C3 botulinum toxin substrate 3 OS=Homo sapiens GN=RAC3 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.086e-44
Identity = 82/116 (70.69%), Postives = 98/116 (84.48%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  VNLGLWDTAGQEDY+RLRPLSY   D+F++ FSLVS AS+ENV  KW PE++H+ P  P++LVGTKLDL
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDL 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC2_DROME (Ras-related protein Rac2 OS=Drosophila melanogaster GN=Rac2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.725e-44
Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +   +NLGLWDTAGQEDY+RLRPLSY   D+F++ FSLV+ AS+ENV  KW PE++H+ P VP++LVGTKLDL
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDL 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC1B_DICDI (Rho-related protein rac1B OS=Dictyostelium discoideum GN=rac1B PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 3.559e-44
Identity = 80/116 (68.97%), Postives = 99/116 (85.34%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  +NLGLWDTAGQEDY+RLRPLSY   D+F++ FS+VS AS+ENV  KW PE+ H++P VP++LVGTKLD+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSPASFENVNGKWHPEICHHAPNVPIILVGTKLDM 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC1C_DICDI (Rho-related protein rac1C OS=Dictyostelium discoideum GN=rac1C PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.929e-44
Identity = 78/116 (67.24%), Postives = 99/116 (85.34%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  +NLGLWDTAGQEDY+RLRPLSY   D+F++ FS++S +SYENV  KW PE+ H++P VP++LVGTK+D+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSYENVSGKWGPEVFHHAPNVPIILVGTKMDM 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC1_DROME (Ras-related protein Rac1 OS=Drosophila melanogaster GN=Rac1 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 1.036e-43
Identity = 79/116 (68.10%), Postives = 97/116 (83.62%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +   +NLGLWDTAGQEDY+RLRPLSY   D+F++ FSLV+ AS+ENV  KW PE++H+ P  P++LVGTKLDL
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDL 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RAC1A_DICDI (Rho-related protein rac1A OS=Dictyostelium discoideum GN=rac1A PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 1.036e-43
Identity = 78/116 (67.24%), Postives = 99/116 (85.34%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTC+LI YT+N FP +YIPTVFDN+SANV+ +G  +NLGLWDTAGQEDY+RLRPLSY   D+F++ FS++S +S+ENV  KW PE+ H++P VP++LVGTKLD+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSFENVNGKWHPEICHHAPNVPIILVGTKLDM 119
[Close]
BLAST of EY674878 vs. ExPASy Swiss-Prot
Match: RACF1_DICDI (Rho-related protein racF1 OS=Dictyostelium discoideum GN=racF1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.013e-43
Identity = 77/116 (66.38%), Postives = 98/116 (84.48%), Query Frame = 3 
Query:   27 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADIFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDL 374
            IKCV VGDGAVGKTCMLI YT+N FP++YIPTVFDN+ AN++ EG   +LGLWDTAGQEDY+RLRPLSY   D+F++ FS++S+AS+ENV  KW  E+ H++PGVP++LVGTK D+
Sbjct:    4 IKCVVVGDGAVGKTCMLISYTTNGFPSEYIPTVFDNYCANLMLEGKPYSLGLWDTAGQEDYDRLRPLSYPHTDVFLICFSIISQASFENVTTKWFKEVNHHAPGVPIILVGTKQDI 119
The following BLAST results are available for this feature:
BLAST of EY674878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAC2_HUMAN9.366e-4570.69Ras-related C3 botulinum toxin substrate 2 OS=Homo... [more]
RAC2_BOVIN9.366e-4570.69Ras-related C3 botulinum toxin substrate 2 OS=Bos ... [more]
RAC3_MOUSE2.086e-4470.69Ras-related C3 botulinum toxin substrate 3 OS=Mus ... [more]
RAC3_HUMAN2.086e-4470.69Ras-related C3 botulinum toxin substrate 3 OS=Homo... [more]
RAC2_DROME2.725e-4468.97Ras-related protein Rac2 OS=Drosophila melanogaste... [more]
RAC1B_DICDI3.559e-4468.97Rho-related protein rac1B OS=Dictyostelium discoid... [more]
RAC1C_DICDI7.929e-4467.24Rho-related protein rac1C OS=Dictyostelium discoid... [more]
RAC1_DROME1.036e-4368.10Ras-related protein Rac1 OS=Drosophila melanogaste... [more]
RAC1A_DICDI1.036e-4367.24Rho-related protein rac1A OS=Dictyostelium discoid... [more]
RACF1_DICDI3.013e-4366.38Rho-related protein racF1 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674878 ID=EY674878; Name=EY674878; organism=Citrus sinensis; type=EST; length=1014bp
CAATGGCTTCTAGTGCTCCTTGGTTCATCAAGTGTGTAACAGTTGGTGAT
GGAGCTGTTGGCAAAACTTGCATGCTTATTTGCTACACAAGTAACAAGTT
TCCTACTGATTATATACCAACGGTGTTCGACAACTTCAGTGCAAATGTGG
TAGCTGAAGGCACTACTGTCAACTTAGGCCTCTGGGACACAGCTGGGCAA
GAGGATTACAATAGATTAAGGCCTTTGAGCTACAGAGGGGCAGACATTTT
TGTCTTAGCTTTCTCATTAGTCAGTCGAGCCAGCTATGAAAACGTTCTGA
AAAAGTGGATCCCTGAACTTCAGCATTACTCTCCCGGAGTACCAGTTGTA
TTGGTTGGAACCAAATTGGATCTGTCGAGAGGATAAGCATTATTTGGCTG
ATCATCCAAGATTGGTGCCTGTGACCACTGCACAAGGAGAGGAACTCCGC
AAACCGATTGGTGGCTTCCTATTACCTTGAATTGCATCTCGTAAAACCTC
AGCTGAAATGGAAATCCAGTTTTTTGATGCTGCCATCAGGGAATTTAACA
AACCCCCCGCACAAACCAAAAGGAAAAGAAAGAAAAAACAACGAGGGATC
CCTAATAAATGTCTTTTTGGGGGAAGGAACCCCTGAAAAATTTTAAATAA
AAACCCTTCCACCACAAAAAAAATGAAGGAAATGGAAGAATCCCCCGGGT
GGGGTTTTTCCAAAGATACCTATAAGCGGGTTAAAAAAAGGAAACAAGGA
TGGTTTATATTTTTCAAGGGTAGGGTTTTTAGAGGGGGGGTTTGGAACCA
AAATATTCCCTTCTTGAATTGTTCAACCCCTTCTTTTATGGGCTGCTTTT
ATTTTTTCTCTCTCCTTAAGTTCTTAATAAAAAAAAAAAAATATCACCCC
CGCTTACCCACATACTTCGAAAAACCTTAAAAGAATTAATTATGATGGAG
GATGAGTGTATTTCTTTTTTTATTCTTTATTCTAAACAATCCTCCCCCCT
CTTTTCCCGTGATT
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