EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.808e-57
Identity = 134/239 (56.07%), Postives = 151/239 (63.18%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            MGK+KIGINGFGRIGRLVARV LQ +DVELVAVNDPFITTDYMTYMFKYD+VHGQWKH ++ +KD KTLLFGEKPVTVFG+RNPEEIPW E GAEYVVESTGVFT               V+ISAP +     ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS+KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIALKDSKTLLFGEKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGV-NEDKYTSDVNIVSNASCTTNCLAPLAKVIHDNFGI----IEGLMTTVHAITATQKTV-DGPSAKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPELNGK 229          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 6.280e-57
Identity = 138/239 (57.74%), Postives = 151/239 (63.18%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  +KIGINGFGRIGRLVARV LQRDDVELVAVNDPFI+TDYMTYMFKYDSVHG WKHHELKVKD+KTLLFGEKPV VFG RNPEEIP A TGAEY+VESTGVFT               VIISAP +     ++ V                +      APLAK   D+FG     +E   +T  S   TQK V  GPS+KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 MAPIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGAWKHHELKVKDEKTLLFGEKPVVVFGRRNPEEIPRASTGAEYIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGV-NEKEYKSDLHIVSNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHSITATQKTV-DGPSAKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPQLNGK 229          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 8.202e-57
Identity = 136/239 (56.90%), Postives = 149/239 (62.34%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M K+KIGINGFGRIGRLVARV LQ DDVELVAVNDPFI+TDYMTYMFKYD+VHGQWKHHE+KVKD KTLLFGEK V VFG RNPEEIPW   GAEYVVESTGVFT               V+ISAP +     ++ V                +      APLAK   DKFG     +E   +T  +   TQK V  GPSSKDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFISTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWGSVGAEYVVESTGVFTDQEKAAAHLKGGAKKVVISAPSKDAPMFVVGV-NEKEYKSDINIVSNASCTTNCLAPLAKVINDKFGI----VEGLMTTVHAITATQKTV-DGPSSKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPVLNGK 229          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.071e-56
Identity = 136/239 (56.90%), Postives = 151/239 (63.18%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  +KIGINGFGRIGRLVARVILQR+D ELVAVNDPFITT+YMTYMFKYDSVHGQWKHH++KVKD+KTLLFGEK VTVFG RNPEEIPW  TGA+YVVESTGVFT               VIISAP +     ++ V                +      APLAK   D+FG     +E   +T  S   TQK V  GPS KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 MAPIKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGV-NEHEYKPELDIVSNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHSITATQKTV-DGPSMKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPSLNGK 229          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 5.316e-56
Identity = 132/239 (55.23%), Postives = 150/239 (62.76%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            MGK+KIGINGFGRIGRLVARV LQ +DVELVAVNDPFITTDYMTYMFKYD+VHG WKH ++ +KD KTLLFG+KPVTVFG+RNPEEIPW E GAEYVVESTGVFT               V+ISAP +     ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS+KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGHWKHSDITLKDSKTLLFGDKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGV-NEDKYTSDVNIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSAKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPDLNGK 229          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.638e-55
Identity = 133/238 (55.88%), Postives = 148/238 (62.18%), Query Frame = 2
Query:   83 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            GK+KIGINGFGRIGRLVARV L RDD+ELVAVNDPFI+TDYMTYMFKYDSVHGQWK HE+KVKD  TLLFGEK VTVFG RNPEEIPW ETG EYVVESTGVFT               V+I+AP +     ++ V                +      APLAK   D+FG     +E   +T  S   TQK V  GPS+KDW  GGR + FN      TGA  K VGK   P L GK
Sbjct:    5 GKIKIGINGFGRIGRLVARVALLRDDIELVAVNDPFISTDYMTYMFKYDSVHGQWKKHEVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVESTGVFTDKEKAAAHIKGGAKKVVITAPSKDAPMFVVGV-NEHEYKPDLAIVSNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHSITATQKTV-DGPSNKDW-RGGRGAGFNIIP-SSTGA-AKAVGK-VLPALNGK 232          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 4.500e-55
Identity = 132/238 (55.46%), Postives = 147/238 (61.76%), Query Frame = 2
Query:   83 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            GK+KIGINGFGRIGRLVARV L RDD+ELV VNDPFI+TDYM+YMFKYDSVHG+WKHHE+ VKD KTLLFGEK V VFG RNPEEIPW E GAEYVVESTGVFT               V+ISAP +     ++ V                +      APLAK   DKFG     +E   +T  S   TQK V  GPS+KDW  GGR + FN      TGA  K VGK   P L GK
Sbjct:    5 GKIKIGINGFGRIGRLVARVALTRDDIELVGVNDPFISTDYMSYMFKYDSVHGKWKHHEVNVKDSKTLLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAKKVVISAPSKDAPMFVVGV-NEHQYKSDVNIVSNASCTTNCLAPLAKVINDKFGI----VEGLMTTVHSITATQKTV-DGPSNKDW-RGGRGAGFNIIP-SSTGA-AKAVGK-VLPALNGK 232          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.309e-54
Identity = 134/237 (56.54%), Postives = 148/237 (62.45%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+KIGINGFGRIGRLVARV L+RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK+ EL VKD  TLLFG+KPVTVF  RNPEEIPWA TGA+ +VESTGVFT               VIISAP +     ++ V                +      APLAK   D+FG     +E   +T  S   TQK V  GPSSKDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGV-NENEYKPEFDIISNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHSITATQKTV-DGPSSKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPALNGK 230          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.917e-54
Identity = 133/237 (56.12%), Postives = 146/237 (61.60%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+KIGINGFGRIGRLVARV L  DD+ELVAVNDPFITT+YMTYMFKYDSVHGQWK  ELKVKD KTLLFG+KP+TVFGVRNPEE PW E GAEYVVESTGVFT               V+ISAP       ++ V                +      APLAK   DKFG     +E   +T  S   T+K V  GPS KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    2 KMKIGINGFGRIGRLVARVALMSDDIELVAVNDPFITTEYMTYMFKYDSVHGQWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSGNAPMFVVGV-NEKEYKKDIDIVSNASCTTNCLAPLAKVLNDKFGI----VEGLMTTVHSITATRKTV-DGPSMKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPALNGK 228          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.810e-54
Identity = 131/239 (54.81%), Postives = 149/239 (62.34%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M KVK+GINGFGRIGRLVARVILQRDD ELVAVNDPFI+TDYMTYMFKYDSVHGQ K HE+K+KD+KTLLFGE PV VFG RNPEEIPW + GA++VVESTGVFT               V+ISAP +     ++ V                +      APLAK   D+FG     +E   +T  +   TQK V  GPS KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 MAKVKVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGV-NEHEYKSDLNIVSNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHAMTATQKTV-DGPSMKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPALNGK 229          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3PD_MAIZE4.808e-5756.07Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ANTMA6.280e-5757.74Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PE_MAIZE8.202e-5756.90Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA1.071e-5656.90Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MAIZE5.316e-5655.23Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GINBI2.638e-5555.88Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY4.500e-5555.46Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PEA1.309e-5456.54Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETCR2.917e-5456.12Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR3.810e-5454.81Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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