EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.853e-25
Identity = 94/235 (40.00%), Postives = 115/235 (48.94%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K       +   L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               VIISAP       +  V                +      APLAK   D F   + GL    H +T+   TQK V  GPS K W +G    +  +     TGA  K VGK   P L GK
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGV-NLDAYSPDMKVVSNASCTTNCLAPLAKVINDNF-EIVEGLMTTVHATTA---TQKTV-DGPSGKLWRDGR--GAAQNIIPAATGA-AKAVGK-VIPALNGK 224          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 6.338e-25
Identity = 93/235 (39.57%), Postives = 115/235 (48.94%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K       +   L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAP       +  V                +      APLAK   D F   + GL    H +T+   TQK V  GPS K W +G    +  +     TGA  K VGK   P L GK
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGV-NLDAYKPDMKVVSNASCTTNCLAPLAKVINDNF-EIVEGLMTTVHATTA---TQKTV-DGPSGKLWRDGR--GAAQNIIPAATGA-AKAVGK-VIPALNGK 224          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 115.161 bits (287), Expect = 6.338e-25
Identity = 83/217 (38.25%), Postives = 111/217 (51.15%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYV---LLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFN 715
            M K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + Y+ KYDS HG+ +  +++ KDD  ++ G   +    VRNP E+PW + GA+YVVESTG+FT               VIISAP +    V   L+ V                +      AP+AK   D FG    GL    H  T+   TQ  V  GPS KDW  GGR ++ N
Sbjct:    1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRS-QVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDVIVSNASCTTNCLAPIAKVINDNFG-LTEGLMTTVHAMTA---TQPTV-DGPSKKDW-RGGRGAAQN 208          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 6.338e-25
Identity = 83/217 (38.25%), Postives = 111/217 (51.15%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYV---LLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFN 715
            M K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + Y+ KYDS HG+ +  +++ KDD  ++ G   +    VRNP E+PW + GA+YVVESTG+FT               VIISAP +    V   L+ V                +      AP+AK   D FG    GL    H  T+   TQ  V  GPS KDW  GGR ++ N
Sbjct:    1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLRS-QVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDLIVSNASCTTNCLAPIAKVINDNFG-LTEGLMTTVHAMTA---TQPTV-DGPSKKDW-RGGRGAAQN 208          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.081e-24
Identity = 90/226 (39.82%), Postives = 114/226 (50.44%), Query Frame = 2
Query:  116 RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            RIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAP       ++ V                +   T  APLAK   D FG  ++GL      +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFK-GTVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGV-NHDKYDNSLKIVSNASCTTTCLAPLAKVIHDNFG-IVKGLMT-TVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 215          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.412e-24
Identity = 85/236 (36.02%), Postives = 114/236 (48.31%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            V IGINGFGRIGRLV R  L+  +  ++A+N+PF+   YM YMFKYDS HG++K     +  +   +     + VF  ++P  I W+  GAEY+VESTG+F                V+ISAP       ++ V                +      APLAK   + FG     +E   +T  +   TQK V  GPS KDW  G   S+ ++     TGA  K VGK   P L GK
Sbjct:    3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGE--FVVNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGV-NEETYESSHDVISNASCTTNCLAPLAKIIHENFGI----VEGLMTTVHAITATQKTV-DGPSGKDWRAGR--SALSNIIPASTGA-AKAVGK-VLPALNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.409e-24
Identity = 93/234 (39.74%), Postives = 116/234 (49.57%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K   +  +    ++ G+K +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAP       +  V                +      APLAK   D F      +    +T+   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    3 KIGINGFGRIGRLVLRAAVDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG-TVSAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTTEKASTHLKGGAKKVVISAPSADAPMFVCGV-NLDAYSPDMKVVSNASCTTNCLAPLAKVINDNFEIVEVLMTTVHATT--ATQKTV-DGPSGKLWRDGRGACQNIIPAS---TGA-AKAVGK-VIPALNGK 224          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.409e-24
Identity = 92/239 (38.49%), Postives = 118/239 (49.37%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  +  GINGF           L+   V++VA+NDPFI  +YM YMFKYDS HG++K   ++ KD K ++ G + + V   R+P +IPW   GA+YV+ESTGVFT               VIISAP       ++ V                +      APLAK   D +G  L GL    H +T+   TQK V  GPS+KDW  GGR +  N      TGA  K VGK   P L GK
Sbjct:    1 MSTINTGINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFK-GTVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGV-NLDKYTSDLTVISNASCTTNCLAPLAKVIHDNYG-ILEGLMTTVHATTA---TQKTV-DGPSNKDW-RGGRGAGANIIP-SSTGA-AKAVGK-VIPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.195e-23
Identity = 82/207 (39.61%), Postives = 112/207 (54.11%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGR 700
            +KIGINGFGRIGR+V R  I    D+E+VA+ND  +  DY+ YM KYDSVHG++   E+ V D  TL+   K + +  V++P E+ W E GA+ VVESTG+F                VI+SAP +  + + ++                 +      AP+AK   DK+G   RGL    H +T+   TQK V  GPS+KDW  GGR
Sbjct:    3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVY-GVNHGTYKGEAIISNASCTTNCLAPVAKVLNDKWG-IKRGLMTTVHAATA---TQKTV-DGPSNKDW-RGGR 199          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.195e-23
Identity = 90/237 (37.97%), Postives = 121/237 (51.05%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPT-AFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ P +      ++V                A   T   APLAK   D FG  + GL    H +T+   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSK--DNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFG-IIEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGRGASQNIIP-SSTGA-AKAVGK-VLPELNGK 225          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P1_DROME4.853e-2540.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]
G3P2_DROPS6.338e-2539.57Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P1_ANAVT6.338e-2538.25Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P1_ANASP6.338e-2538.25Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_MESAU1.081e-2439.82Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_DICDI1.412e-2436.02Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]
G3P_DROHY2.409e-2439.74Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3P3_RHIRA2.409e-2438.49Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P_RALSO1.195e-2339.61Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3P1_ESCF31.195e-2337.97Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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