EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.891e-53
Identity = 130/238 (54.62%), Postives = 148/238 (62.18%), Query Frame = 2
Query:   83 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            GK+KIGINGFGRIGRLVARV LQRDD+ELVAVNDPFI+T+ +T +FKYDSVHGQWK HE+KVKD+KTLLFGEK V VFG RNPEEIPW E GAEYVVESTGVFT               V+ISAP +     ++ V                +      APLAK   D+FG     +E   +T  S   TQK V  GPS+KDW  GGR + FN      TGA  K VGK   P L GK
Sbjct:    5 GKIKIGINGFGRIGRLVARVALQRDDIELVAVNDPFISTESLTSLFKYDSVHGQWKKHEVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGV-NEHEYKSDLTIVSNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHSITATQKTV-DGPSNKDW-RGGRAAGFNIIP-SSTGA-AKAVGK-VLPVLNGK 232          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 9.384e-53
Identity = 129/228 (56.58%), Postives = 143/228 (62.72%), Query Frame = 2
Query:  113 GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            GRIGRLVARV LQRDDVELVAVNDPFI+TDYMTYMFKYDSVHGQWKHHELKVKD+KTLLFGEK V VFG+RNPEEIPWAE GA++VVESTGVFT               V+ISAP +     ++ V                +      APLAK   D+FG     +E   +T  S   TQK V  GPS KDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGV-NEKEYKPEYDIVSNASCTTNCLAPLAKVINDRFGI----VEGLMTTVHSLTATQKTV-DGPSMKDW-RGGRATSFNIIP-SSTGA-AKAVGK-VLPALNGK 218          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.228e-44
Identity = 116/237 (48.95%), Postives = 139/237 (58.65%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+K+GINGFGRIGRLVARV L+RDD+ELVA+NDPFIT +YMTYMFKYDS HGQWK  E+ +  +  L FG  PV V+  R+P EIPW + GA++VVESTGVFT               V+ISAP +     ++ V                +      APLAK   DKFG  L GL    H +T+   TQK V  GPSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    6 KIKVGINGFGRIGRLVARVALERDDIELVAINDPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVMGV--NENKYSDEDIVSNASCTTNCLAPLAKVINDKFG-ILEGLMTTVHATTA---TQKTV-DGPSSKDW-RGGRSAATNIIP-SATGA-AKAVGK-VLPELNGK 231          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.831e-41
Identity = 112/215 (52.09%), Postives = 121/215 (56.28%), Query Frame = 2
Query:  176 VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWV--------XXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VNDPFITTDYMTYMFKYD+VHGQWKHHE+KVKD KTLLFGEK V VFG RNPEEIPWA  GAEYVVESTGVFT               VIISAP +     +  V                    CP         APLAK   D+FG     +E   +T  +   TQK V  GPSSKDW  GGR +SFN      TGA  K VGK   P L GK
Sbjct:    1 VNDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPSKDAPMFVCGVNEKEYKSDIDIVSNASCTTNCP---------APLAKVINDRFGI----VEGLMTTVHAMTATQKTV-DGPSSKDW-RGGRAASFNIIP-SSTGA-AKAVGK-VLPELNGK 197          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.527e-37
Identity = 109/239 (45.61%), Postives = 134/239 (56.07%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAG---PPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGRLV R  L+   VE+VAVNDPFI  DYM YMFK+DSVHG++K   ++ KD K ++ G KP+ VFG R+P  IPW  +GA+YVVESTGVFT               VIISAP       +  V             P ++         APLAK   DKFG  + GL +  H +T+   TQK V  GPS+KDW  GGR  S N+  +  +    K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRLVIRNALEAQGVEVVAVNDPFIPLDYMVYMFKFDSVHGRYK-GTVEAKDGKLIIAG-KPIAVFGERDPASIPWGASGADYVVESTGVFTTIDKASAHLKGGAKKVIISAPSADAPMYVCGVNLDAYDPRR----PSISNASCTTNCLAPLAKVIHDKFG-IVEGLMSTIHATTA---TQKTV-DGPSNKDW-RGGR--SVNNNIIPSSTGAAKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.173e-35
Identity = 103/237 (43.46%), Postives = 127/237 (53.59%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST---SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            + IGINGFGRIGRLV R+ LQR D+++VAVNDPFI  +Y  YMFKYDS HG++K  E+  KDD  ++ G+  + VFG ++P  IPW + G +YV+ESTGVFT               VII+AP       ++ V                +      APLAK   DKF     G+E    T   S   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSDIKVVAVNDPFIAPEYAAYMFKYDSTHGRYK-GEVTSKDDSLVIDGQS-IKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSSDAPMFVVGV-NEQKYTPDLKIVSNASCTTNCLAPLAKVINDKF-----GIEEGLMTTVHSITATQKTV-DGPSHKDW-RGGRTASGNIIP-SSTGA-AKAVGK-VIPELNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.756e-35
Identity = 105/235 (44.68%), Postives = 131/235 (55.74%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+GINGFGRIGR+V R  L+  D+++VA+NDPFI  DYM YMFKYDS HG++K  +++ KD K ++ G KP++VFG R+P  IPW + GA+YVVESTGVFT               VIISAP       +  V                +      APLAK   D FG  + GL    H +T+   TQK V  GPS KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    4 KVGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFK-GKVETKDGKLVIEG-KPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGV-NLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFG-IVEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGRGAAANIIP-SSTGA-AKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.966e-34
Identity = 110/244 (45.08%), Postives = 134/244 (54.92%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGKTRSGNGLS 814
            VK GINGFGRIGR+V R  L   D+++VAVNDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KP+ VF  ++P  IPW   GAEY+VESTGVFT               VIISAP       +  V                +      APLAK   DKFG  ++GL    H +T+   TQK V  GPS+KDW+ GGR S  N+     TGA  K VGK   P L GK    NGL+
Sbjct:    3 VKAGINGFGRIGRIVLRNALLHGDIDVVAVNDPFIDLEYMVYMFKYDSVHGRFK-GSVEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFVCGV-NLDAYDSKYKVISNASCTTNCLAPLAKVIHDKFG-IVQGLMTSVHATTA---TQKTV-DGPSNKDWL-GGR-SVGNNIIPSSTGA-AKAVGK-VIPSLNGKL---NGLA 231          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.353e-34
Identity = 104/236 (44.07%), Postives = 129/236 (54.66%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +K+GINGFGRIGR+V R  L+  +VE+VAVNDPFI T+Y  YMFKYDS HG++K  +++ KD   ++ G K + VFG R+P  IPW + GA+YVVESTGVFT               VIISAP       ++ V                +      APLAK   DK+G     +E   +T  S   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    3 IKVGINGFGRIGRIVLRNALKNPEVEVVAVNDPFIDTEYAAYMFKYDSTHGRFK-GKVEAKDGGLIIDG-KHIQVFGERDPSNIPWGKAGADYVVESTGVFTGKEAASAHLKGGAKKVIISAPSGDAPMFVVGV-NLDAYKPDMTVISNASCTTNCLAPLAKVVNDKYGI----IEGLMTTVHSITATQKTV-DGPSHKDW-RGGRTASGNIIP-SSTGA-AKAVGK-VIPELNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.756e-34
Identity = 100/236 (42.37%), Postives = 129/236 (54.66%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  LQ  ++E+VA+NDPFI  DYM YMFKYD+VHG++K   ++VKD K ++ G   +TVF  +NP +I W   GA+Y+VESTGVFT               V+ISAP       ++ V                +      APLAK   DK+G    GL    H +T+   TQK V  GPS KDW  GGR  S N+  +  +    K VGK   P L G+
Sbjct:    3 VKVGINGFGRIGRIVLRNALQLGNIEVVAINDPFIALDYMVYMFKYDTVHGRYK-GTVEVKDGKLVVDGH-AITVFAEKNPADIKWGSAGADYIVESTGVFTTVEKASLHLQGGAKKVVISAPSADAPMFVVGV-NLDKYDSKYQVISNASCTTNCLAPLAKVIHDKYG-IAEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGR--SVNNNIIPSSTGAAKAVGK-VIPSLNGR 226          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3PC_TAXBA1.891e-5354.62Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC9.384e-5356.58Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA1.228e-4448.95Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_HORVU4.831e-4152.09Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_OMPOL5.527e-3745.61Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_DEBHA5.173e-3543.46Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_CRYCU6.756e-3544.68Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_PHACH1.966e-3445.08Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_YARLI3.353e-3444.07Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P_SCHCO9.756e-3442.37Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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