EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO55 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2 
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1 
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160
[Close]
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO45 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2 
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1 
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160
[Close]
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO27 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2 
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1 
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160
[Close]
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO24 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2 
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1 
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
E4PD_ECO558.066e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO458.066e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO278.066e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO248.066e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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