EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.756e-34
Identity = 103/253 (40.71%), Postives = 125/253 (49.41%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGKTRSGNGLSPCP 823
            M K KIGINGFGRIGRLV R  +++D VE+VAVNDPFI  DYM YMFKYDS HG++K H +  +  K ++   K    + V   ++P EIPW   GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   DKFG  + GL    H +T+   TQK V  GPS K W +G          +  +    K VGK   P L GK        P P
Sbjct:    1 MSKPKIGINGFGRIGRLVLRAAVEKDTVEVVAVNDPFINIDYMVYMFKYDSTHGRFKGH-VSAEGGKLIVTNGKTTHQIAVHNSKDPAEIPWGVEGAEYVVESTGVFTHTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNDKYDKANNHIISNASCTTNCLAPLAKVIHDKFG-IIEGLMTTVHATTA---TQKTV-DGPSGKLWRDG---RGAGQNIIPASTGAAKAVGK-VIPDLNGKLTGMASRVPTP 243          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.756e-34
Identity = 104/239 (43.51%), Postives = 126/239 (52.72%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  +K+GINGFGRIGR+V R   Q  +VE+VAVNDPFI  +Y  YM KYDS HGQ+      V+D   L+   + V  +  RNPEEIPWAETGAEY+VESTGVFT               VIISAP       ++ V                +      APLAK   D+F      +E   +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAAQSCEVEVVAVNDPFIEPEYAAYMLKYDSTHGQFNGDIQTVEDG--LVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMFVMGV-NHKSYTTDLEVISNASCTTNCLAPLAKVINDEF----TIIEGLMTTIHSYTATQKTV-DGPSAKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPALNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.274e-33
Identity = 104/237 (43.88%), Postives = 124/237 (52.32%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST---SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +KIGINGFGRIGRLV RV L R D+E+VAVNDPFI  DY  YMFKYDS HG++K  E+    D  ++ G K + VF  R+P  IPW ++G +YV+ESTGVFT               VII+AP       ++ V                +      APLAK   D F     G+E    T   S   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKDIEVVAVNDPFIAPDYAAYMFKYDSTHGRYK-GEVTASGDDLVIDGHK-IKVFQERDPANIPWGKSGVDYVIESTGVFTKVEGAQKHIDAGAKKVIITAPSADAPMFVVGV-NEDKYTPDLKIISNASCTTNCLAPLAKVVNDTF-----GIEEGLMTTVHSITATQKTV-DGPSHKDW-RGGRTASGNIIP-SSTGA-AKAVGK-VIPELNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.707e-33
Identity = 105/236 (44.49%), Postives = 126/236 (53.39%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++  D+E+VAVNDPFI  DYM YMFKYDS HG++K   ++VKD K L    K + VFG ++P  I W E GAEYVVESTGVFT               V+ISAP       +  V                +      APLAK   D F   + GL    H +T+   TQK V  GPS KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVLRNAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFK-GSVEVKDGK-LYINNKAIAVFGEKDPANIKWGEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAPSADAPMFVCGV-NLDAYKPEYQIVSNASCTTNCLAPLAKVIHDNF-TIIEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGRGAAANIIP-SSTGA-AKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.079e-32
Identity = 98/236 (41.53%), Postives = 127/236 (53.81%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSF---PGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            ++GINGFGRIGRLV R  +++D + +VA+NDPFI  +YM YMFK+DS HG++    ++ KD K ++ G K +T++G R+P EIPWAE GA+YVVESTGVFT               VIISAP +     +  V                +      APL K   +K+     G+E    T+      TQK V  GPS KDW  GGR +  N      TGA  K VGK   P L GK
Sbjct:    5 QVGINGFGRIGRLVLRAAIEKDTMSVVAINDPFIDLEYMAYMFKFDSTHGRYA-GSVETKDGKLIVNG-KSITIYGHRDPAEIPWAEAGADYVVESTGVFTLKEKAEKHFTGGAKKVIISAPSKDAPMFVCGV-NEDKYTPDLNVISNASCTTNCLAPLVKVIHEKY-----GIEEGLMTTVHATTATQKTV-DGPSQKDW-RGGRGAGANIIP-SSTGA-AKAVGK-VLPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 1.079e-32
Identity = 104/239 (43.51%), Postives = 128/239 (53.56%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  +K+GINGFGRIGR+V R  ++  D+E+VAVNDPFI T Y  YM KYDS HG +K  E++V D K L+   K V  +  RNP +I W+ETGAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D +G     +E   +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAVEHPDIEVVAVNDPFIETTYAAYMLKYDSSHGLFK-GEVEV-DGKDLVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPSADAPMYVMGV-NESDYDGSADVISNASCTTNCLAPLAKVINDNYGI----VEGLMTTVHSYTATQKTV-DGPSAKDW-RGGRGAAQNIIP-SSTGA-AKAVGK-VIPALNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 2.403e-32
Identity = 100/240 (41.67%), Postives = 127/240 (52.92%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            MGKVK+GINGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+T+F  R+P +I W + GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G + +    S   TGA  K VGK   P L GK
Sbjct:    1 MGKVKVGINGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGV-NHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGALQNIIPAS---TGA-AKAVGK-VIPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.403e-32
Identity = 102/239 (42.68%), Postives = 127/239 (53.14%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  +K+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG + + E+K ++   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT               VIISAP       ++ V                +      APLAK   DKFG     +E   +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAIEHPEVEIVAVNDPFIETKYAAYMLKYDSTHGIF-NGEIK-QEGNDLVINGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAPSADAPMYVM-VVNEKSYDGSADVISNASCTTNCLAPLAKVINDKFGI----VEGLMTTVHSYTATQKTV-HGPSAKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.403e-32
Identity = 103/234 (44.02%), Postives = 126/234 (53.85%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  D+   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAP       ++ V                +      APLAK   D FG  + GL      S+  TQK V  GPSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGV-NNETYKSDIKVLSNASCTTNCLAPLAKVVNDNFG-LVEGLMT-TVHSYTATQKTV-DGPSSKDW-RGGRAAAQNIIP-SSTGA-AKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.403e-32
Identity = 100/253 (39.53%), Postives = 125/253 (49.41%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP---VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGKTRSGNGLSPCP 823
            M K K+GINGFGRIGRLV R  +++D V++VAVNDPFI  DYM YMFKYDS HG++K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   DKFG  + GL    H +T+   TQK V  GPS K W +G          +  +    K VGK   P L GK        P P
Sbjct:    1 MSKPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFK-GSVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMYDKANNHIISNASCTTNCLAPLAKVIHDKFG-IIEGLMTTVHATTA---TQKTV-DGPSGKLWRDG---RGAGQNIIPASTGAAKAVGK-VIPGLNGKLTGMANRVPTP 243          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_ONCVO9.756e-3440.71Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchoc... [more]
G3P_ERYGR9.756e-3443.51Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3P_CANAL1.274e-3343.88Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3P_CRYNE3.707e-3344.49Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3PC_GRAVE1.079e-3241.53Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_TRIKO1.079e-3243.51Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P_PONAB2.403e-3241.67Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo ... [more]
G3P_COLGL2.403e-3242.68Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_COCIM2.403e-3244.02Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_BRUMA2.403e-3239.53Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
back to top