EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 3.138e-32
Identity = 99/240 (41.25%), Postives = 127/240 (52.92%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            MGKVK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+T+F  R+P +I W + GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G + +    S   TGA  K VGK   P L GK
Sbjct:    1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGV-NHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGALQNIIPAS---TGA-AKAVGK-VIPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.099e-32
Identity = 101/239 (42.26%), Postives = 129/239 (53.97%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M   K+GINGFGRIGR+V R  ++ DD+++VAVNDPFI T+Y  YM KYDS HGQ+K  ++KV  D   + G+K V  +  R+P  IPWAE+ A YVVESTGVFT               V+ISAP       ++ V                +      APLAK   D+F      +E+  +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    1 MAPTKVGINGFGRIGRIVFRNAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFK-GDIKVLSDGLEVNGKK-VKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMYVMGV-NNETYNGEADVISNASCTTNCLAPLAKVINDEF----TIIESLMTTIHSYTATQKTV-DGPSAKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.099e-32
Identity = 99/234 (42.31%), Postives = 124/234 (52.99%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  L   +V +VAVNDPFI  +YM YMFKYDSVHG++K   ++ K  K ++ G K ++VFG ++   IPW+  GAEY+VESTGVFT               VIISAP       +  V                +      APLAK   DKFG     +    +T+   TQK V  GPS+KDW  GGR  S N   +  +    K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVLRNALLNPEVNVVAVNDPFIALEYMVYMFKYDSVHGRFK-GTVETKGGKLIVDG-KEISVFGEKDAGAIPWSSVGAEYIVESTGVFTTIEKASAHLKGGAKKVIISAPSADAPMYVCGV-NLDSYDSQHAVISNASCTTNCLAPLAKVIHDKFGIVEALMTTVHATT--ATQKTV-DGPSNKDW-RGGR--SVNGNIIPSSTGAAKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.992e-32
Identity = 102/234 (43.59%), Postives = 126/234 (53.85%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  ++   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAP       ++ V                +      APLAK   D FG  + GL      S+  TQK V  GPSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSENGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGV-NNETYKSDIKVLSNASCTTNCLAPLAKVVNDNFG-LVEGLMT-TVHSYTATQKTV-DGPSSKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.992e-32
Identity = 104/236 (44.07%), Postives = 127/236 (53.81%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  LQ  D+E+VAVNDPFI  +YM YMFKYDSVHG++K   ++VK+   ++ G +P+ VF  R+P  IPW   GA+YVVESTGVFT               V+ISAP       +  V                +      A LAK   D FG  + GL    H +T+   TQK V  GPS KDW  GGR    N+     TGA  K VGK   P L GK
Sbjct:    2 VKVGINGFGRIGRIVLRNALQFQDIEVVAVNDPFIDLEYMAYMFKYDSVHGRFK-GTVEVKNGSFVVDG-RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYVCGV-NLDKYNPKDTIISNASCTTNCLATLAKVIHDNFG-IVEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGR-GVGNNIIPSSTGA-AKAVGK-VIPSLNGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 9.131e-32
Identity = 97/235 (41.28%), Postives = 120/235 (51.06%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST---SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +GINGFGRIGRLV R+ L RDD+ ++A+NDPFI  DY  YMFKYDS HG++K       + K L+   K + VF  R+P  IPW + G +YV++STGVFT               VII+AP +     ++ V                +      APLAK   D F     G+E    T   S   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    5 VGINGFGRIGRLVLRIALSRDDINVIAINDPFIAPDYAAYMFKYDSTHGKFK--GTVTHEGKYLVINGKKIEVFQERDPANIPWGKEGVDYVLDSTGVFTTIEGAQKHIDAGAKKVIITAPSKDAPMFVVGV-NHEEYTPDIKILSNASCTTNCLAPLAKVINDIF-----GIEEGLMTTVHSITATQKTV-DGPSHKDW-RGGRTASGNIIP-SSTGA-AKAVGK-VLPALAGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 9.131e-32
Identity = 97/238 (40.76%), Postives = 118/238 (49.58%), Query Frame = 2
Query:   83 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            GK+KIGINGFGRIGRLV R  + R D+E+VA+NDPFI  +YM YMFKYDSVH  W  H    KD    L   + +  F   +P +I W   GA+ V+ESTGVFT               VII+AP       ++ V                +      APLAK    KFG    GL    H +T+   TQK V  GPS KDW  GGR  + N   +  +    K VGK   P L GK
Sbjct:    3 GKIKIGINGFGRIGRLVMRATMLRPDIEVVAINDPFIDAEYMAYMFKYDSVHKTWPGHVNGSKDG--FLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVIITAPSNDAPMYVMGVNHEKYNPATDHIISNASCTTNCLAPLAKVVNSKFG-IKEGLMTTVHATTA---TQKTV-DGPSKKDW-RGGR--AVNGNIIPSSTGAAKAVGK-VLPELKGK 229          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31
Identity = 99/236 (41.95%), Postives = 120/236 (50.85%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++ DDVE+VAVNDPFI T Y  YM KYDS HGQ+K  +++      L    K +  +  R+P  IPW + G +YVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG      E   +T  S+  TQK V  GPS KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFK-GDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPSADAPMFVMGV-NEKSYRPDISVLSNASCTTNCLAPLAKVIHDNFGI----AEGLMTTIHSYTATQKTV-DGPSHKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPALNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 1.193e-31
Identity = 99/235 (42.13%), Postives = 124/235 (52.77%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+GINGFGRIGR+V R  ++ + V++VAVNDPFI   Y  YM KYDS HG++  +     D  TL+   K +  +  R+P +IPW+ETGAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   DKFG     +E   +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    5 KVGINGFGRIGRIVFRNAIEHEGVDIVAVNDPFIEVHYAAYMLKYDSTHGRF--NGTVEFDGNTLIVNGKKIKFYAERDPAQIPWSETGAEYVVESTGVFTKQEKASLHLKGGAKKVIISAPSSDSPMFVMGV-NNDQYTKDITVLSNASCTTNCLAPLAKVINDKFGI----VEGLMTTVHSYTATQKVV-DGPSNKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPSLNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.558e-31
Identity = 100/236 (42.37%), Postives = 127/236 (53.81%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            V +GINGFGRIGR+V R  L    +++VA+NDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT               VIISAP       ++                  +      APL K   DK+G  + GL +  H +T+   TQK V  GPS+KDW  GGR +  N+     TGA  K VGK   P L GK
Sbjct:    2 VNVGINGFGRIGRIVFRNALLNPKIQVVAINDPFINLEYMVYMFKYDSVHGRFK-GTVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMG-CNLDQYDPKYTVISNASCTTNCLAPLTKVIHDKYG-IIEGLMSTIHATTA---TQKTV-DGPSNKDW-RGGR-AVVNNIIPSSTGA-AKAVGK-VIPSLNGK 225          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_HUMAN3.138e-3241.25Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P_SCLSC4.099e-3242.26Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_LENED4.099e-3242.31Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P_COCP76.992e-3243.59Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P2_AGABI6.992e-3244.07Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_PICAN9.131e-3241.28Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3PC_CHLRE9.131e-3240.76Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_PARBA1.193e-3141.95Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_MONAN1.193e-3142.13Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_LYOSH1.558e-3142.37Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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