EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.319e-30
Identity = 98/236 (41.53%), Postives = 125/236 (52.97%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++ DD+++VAVNDPFI   Y  YM +YDS HG +K   + V+    ++ G+K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAP       ++ V                +      APLAK   D F      +E   +T  S+  TQK V  GPSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFK-GTIAVEGSDLVVNGKK-VKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGV-NNESYDGSANVISNASCTTNCLAPLAKVIHDNF----TIVEGLMTTVHSYTATQKTV-DGPSSKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPDLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.319e-30
Identity = 97/246 (39.43%), Postives = 123/246 (50.00%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK------PVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M K K+GINGFGRIGRL  R  +++D V++VA+NDPFI  DYM YMF YDS HG++     K+      L  EK       + VF +++P EI WAE GAEYV+ESTGVFT               V+ISAP       ++ V                +      APLAK   D+FG     +E   +T  +   TQK V  GP+ K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    1 MVKPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDPAKDNVISNASCTTNCLAPLAKVINDEFGI----IEGLMTTVHAVTATQKTV-DGPNGKQWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 233          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.722e-30
Identity = 97/237 (40.93%), Postives = 123/237 (51.90%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G KP+T+F  R+P  I W + GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGV-NHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 2.249e-30
Identity = 97/237 (40.93%), Postives = 124/237 (52.32%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+G+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+T+F  R+P  I W + GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGV-NHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.249e-30
Identity = 98/237 (41.35%), Postives = 124/237 (52.32%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+G+NGFGRIGRLV R  +    VE+VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+T+F  R+P  I W E GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGV-NHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.249e-30
Identity = 99/236 (41.95%), Postives = 124/236 (52.54%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++ +DV++VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K +     ++P  IPW+ETGA YVVESTGVFT               V+ISAP       ++ V                +      APLAK   DK+      +E   +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGV-NHETYKPDIEALSNASCTTNCLAPLAKVIHDKY----TIIEGLMTTIHSYTATQKVV-DGPSAKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPELNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.249e-30
Identity = 101/234 (43.16%), Postives = 120/234 (51.28%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++  +V +VAVNDPFI T Y  YM KYDS HGQ+K   + V  +   + G K VT +  R+P  IPW + G EYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG    GL      S+  TQK V  GPSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFK-GTIDVNSNGLTVNG-KAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGV-NEKTYDPSVNVLSNASCTTNCLAPLAKVINDNFG-LTEGLMT-TIHSYTATQKTV-DGPSSKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPSLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 2.249e-30
Identity = 99/233 (42.49%), Postives = 124/233 (53.22%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+GINGFGRIGR+V R  L+   VE+VA+NDPFI   Y  YMFKYDS HG++K  ++KV D K L+   K +  +  R+P  IPW ++GAEY+VESTGVFT               VIISAP       ++ V                +      APLAK   DKF   + GL      ++  +QK V  GPSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    4 KVGINGFGRIGRVVLRNALETGAVEVVALNDPFIEPHYAEYMFKYDSTHGRFK-GDIKV-DGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFKGGAKKVIISAPSADAPMYVMGV--NEDTYAGANVISNASCTTNCLAPLAKTLNDKF-TIVEGLMTA-IHAYTASQKTV-DGPSSKDW-RGGRAAAQNLIP-SSTGA-AKAVGK-VIPELAGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.937e-30
Identity = 97/235 (41.28%), Postives = 124/235 (52.77%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+GINGFGRIGR+V R  +   +V++VAVNDPFI T Y  YM KYDS HGQ+K   ++  ++  ++ G+K +  F  R+P  IPW  TGA+Y+VESTGVFT               V+ISAP       ++ V                +      APLAK   DKFG     +E   +T  S+  TQK V   PSSKDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    4 KVGINGFGRIGRIVFRNAINHGEVDVVAVNDPFIETHYAAYMLKYDSTHGQFK-GTIETYEEGLIVNGKK-IRFFAERDPAAIPWGTTGADYIVESTGVFTTQEKAAAHLKGGAKKVVISAPSADAPMFVMGV-NNTSYTKDINVLSNASCTTNCLAPLAKVINDKFGI----VEGLMTTVHSYTATQKVV-DAPSSKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPTLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.011e-30
Identity = 96/235 (40.85%), Postives = 122/235 (51.91%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VKIG+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMFKYDS HG++ H  +K ++ K ++ G+  +T+F  R+P  I W + GAEYVVESTGVFT               V+ISAP       ++ V                +      APLAK   D +G  + GL      +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQ-AITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFVMGV-NHEKYDNSLKVVSNASCTTNCLAPLAKVIHDNYG-MVEGLMT-TVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 225          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_SORMA1.319e-3041.53Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P1_GLORO1.319e-3039.43Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]
G3P_FELCA1.722e-3040.93Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_RAT2.249e-3040.93Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus... [more]
G3P_MOUSE2.249e-3041.35Glyceraldehyde-3-phosphate dehydrogenase OS=Mus mu... [more]
G3P_COCHE2.249e-3041.95Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_AJECA2.249e-3043.16Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P1_TRIKO2.249e-3042.49Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_ASPNG2.937e-3041.28Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_TRISI5.011e-3040.85Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
back to top