EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.544e-30
Identity = 102/235 (43.40%), Postives = 125/235 (53.19%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            KIGINGFGRIGRLV R  L+    ++VAVNDPFI  +YM YMFKYDS HG +K  E+K +D   ++ G+K +TVF    PE IPW++ GAEY+VESTGVFT               VIISAP       +  V                +      AP+AK   + F   + GL    H  T+   TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFKG-EVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGV-NLEKYSKDMKVVSNASCTTNCLAPVAKVLHENF-EIVEGLMTTVHAVTA---TQKTV-DGPSAKDW-RGGRGAAQNIIP-SSTGA-AKAVGK-VIPELDGK 223          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.544e-30
Identity = 90/240 (37.50%), Postives = 121/240 (50.42%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST---SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M  + +GINGFGRIGRLV R  LQ+  +++VA+NDPFI   YM YMFKYDS HG++K  E+ ++D K L+  +  ++VF    P EIPW + GA+YVVESTGVF                V++SAP       ++ V                +      APLAK   D F     G+E    T   ++  TQK V  GPS+K W +G      +   +  +    K VGK   P L GK
Sbjct:    1 MSDLCVGINGFGRIGRLVLRACLQKG-IKVVAINDPFIDLQYMVYMFKYDSTHGRYK-GEVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDPSSMTIVSNASCTTNCLAPLAKVIHDNF-----GIEEALMTTVHAYTATQKTV-DGPSAKAWRDG---RGAHQNIIPASTGAAKAVGK-VIPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 6.544e-30
Identity = 97/236 (41.10%), Postives = 123/236 (52.12%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+GINGFGRIGR+V R  ++ DD+ +VAVNDPFI   Y  YM +YD+ HG +K   ++V D   L+   K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAP       ++ V                +      APLAK   D F      +E   +T  S+  TQK V  GPS+KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIHIVAVNDPFIEPKYAAYMLRYDTTHGNFK-GTIEV-DGADLVVNGKKVKFYTERDPAAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGV-NNETYDGSADVISNASCTTNCLAPLAKVIHDNF----TIVEGLMTTVHSYTATQKTV-DGPSAKDW-RGGRTAAQNIIP-SSTGA-AKAVGK-VIPDLNGK 226          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Scenedesmus vacuolatus GN=GapC PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.116e-29
Identity = 95/230 (41.30%), Postives = 117/230 (50.87%), Query Frame = 2
Query:  104 NGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK-TLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            NGFGRIG LV R  L R DV++VA+NDPFI  +YM YMFKYDSVHG+   +E  V+ DK  +    + +    + +P +IPW E GA+YVVESTGVFT               V+ISAP       ++ V                +      APLAK   D FG     +    +T+   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    1 NGFGRIGSLVLRATLDRKDVKVVAINDPFIEGEYMAYMFKYDSVHGR---YEGDVQGDKHGITINGEQIKTLAMMDPTQIPWGEVGADYVVESTGVFTTVDKCQAHLKGGAKKVVISAPSADAPMFVMGVNADKYDPKQHTVVSNASCTTNCLAPLAKVVNDTFGIKEALMTTVHATT--ATQKTV-DGPSKKDW-RGGRGASANIIP-SSTGA-AKAVGK-VIPELNGK 220          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.116e-29
Identity = 94/236 (39.83%), Postives = 121/236 (51.27%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSF---PGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            K+GINGFGRIGRLV R  +++   ++VA+NDPFI  DYM YM KYDS HG++   ++ +KD K  + G   +TVF  R+P EIPWA   A+Y+VE+TGVFT               V+ISAP +     +  V                +      APL K   +K+     G+E    T+      TQK V  GPS+KDW  GGR    N      TGA  K VGK   P L GK
Sbjct:    5 KVGINGFGRIGRLVLRAAIEKGTCQVVAINDPFIDLDYMAYMLKYDSTHGRYA-GDVSIKDGKLQVDGNS-ITVFAHRDPAEIPWATAAADYIVEATGVFTLKDKAAAHFKGGAKKVVISAPSKDAPMFVCGV-NEAKYTPDLDIISNASCTTNCLAPLVKVIHEKY-----GIEEGLMTTVHATTATQKTV-DGPSNKDW-RGGRGRGRNIIP-SSTGA-AKAVGK-VMPELNGK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P3_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis briggsae GN=gpd-3 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.116e-29
Identity = 94/246 (38.21%), Postives = 120/246 (48.78%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK---HHE----LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M K  +GINGFGRIGRLV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K    HE    L  K+ K+    +  + V+  R+P EI W   GA+YVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G          +  +    K VGK   P L GK
Sbjct:    1 MSKPSVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGSAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGI----IEGLMTTVHAVTATQKTV-DGPSGKLWRDG---RGAGQNIIPASTGAAKAVGK-VIPELNGK 233          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.904e-29
Identity = 97/237 (40.93%), Postives = 122/237 (51.48%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+G+NGFGRIGRLV R       VE+VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFK-GTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGV-NQDKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.904e-29
Identity = 101/248 (40.73%), Postives = 126/248 (50.81%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGKTRSGNGLSPCPS 826
            VK+GINGFGRIGR+V R  ++  ++E+VAVNDPFI  +Y  YM KYDS HG +K  E+K KD   L+   K V     R+P  IPW  +GAEY+VESTGVFT               VIISAP       ++ V                +      APLAK   DK+      +E   +T  S+  TQK V  GPS KDW  GGR ++ N      TGA  K VGK   P L GK    +   P P+
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEIEVVAVNDPFIDPEYAAYMLKYDSSHGVFK-GEIK-KDADGLIVNGKKVKFHTERDPSAIPWKASGAEYIVESTGVFTTTEKAKAHLTGGAKKVIISAPSADAPMYVMGV-NEKTYDGKADVISNASCTTNCLAPLAKVIHDKY----TIVEGLMTTVHSYTATQKTV-DGPSGKDW-RGGRGAAQNIIP-SSTGA-AKAVGK-VIPDLNGKLTGMSMRVPTPN 238          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.904e-29
Identity = 97/237 (40.93%), Postives = 122/237 (51.48%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+G+NGFGRIGRLV R  +    V++VA+NDPFI  +YM YMFKYDS HG +K   +K ++ K ++ G   +T+F  R+P  I WA+ GAEYVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFK-GTVKAENGKLVINGH-AITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGV-NHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.904e-29
Identity = 94/246 (38.21%), Postives = 121/246 (49.19%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK---HHE----LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M K  +GINGFGRIGRLV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K    HE    L  K+ K+    +  + V+  R+P EI W  +GA+YVVESTGVFT               VIISAP       ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS K W +G          +  +    K VGK   P L GK
Sbjct:    1 MTKPSVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGI----IEGLMTTVHAVTATQKTV-DGPSGKLWRDG---RGAGQNIIPASTGAAKAVGK-VIPELNGK 233          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_PANVR6.544e-3043.40Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_ONCMY6.544e-3037.50Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorh... [more]
G3P_NEUCR6.544e-3041.10Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3PC_SCEVA1.116e-2941.30Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CHOCR1.116e-2939.83Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P3_CAEBR1.116e-2938.21Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P_CRIGR1.904e-2940.93Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]
G3P_CLAPU1.904e-2940.73Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]
G3P_CHICK1.904e-2940.93Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P3_CAEEL1.904e-2938.21Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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