EY674872

Overview
NameEY674872
Unique NameEY674872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.746e-30
Identity = 63/151 (41.72%), Postives = 88/151 (58.28%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG    + +E+ AF A    +T+ G+  A  G  AWG CY  E     SYC  S ++  PC PG +YYGRG I I +NYNYG  G A+  +LL++P+ +  NA ++F++AIW WMT  +  +PS HD   G W P+  D  + R P +G
Sbjct:  128 GTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQW--PCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMT-AQSPKPSCHDVITGRWTPSAADRAANRLPGYG 275          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.280e-30
Identity = 63/151 (41.72%), Postives = 89/151 (58.94%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG    + +EI AFLA    +T+ G+  A  GP AWG CY  E     +YC  S ++  PC  G +YYGRG I I +NYNYG  G+A+  DL+++P+ +  +A ++F+ A W WMTP +  +PS H+   G W P+  D  + R P FG
Sbjct:  108 GTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQW--PCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTP-QSPKPSCHNVITGGWTPSGADRSAGRLPGFG 255          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.978e-30
Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   20 GTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            G    K +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S ++  PC  G +YYGRG I I WNYNYG  G A+  DLL++P+ +  +  ++F+ A+W WMTP +  +PS HD   G W P+  D  + R P +G
Sbjct:  114 GDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPS-TYCQASSEF--PCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVITGGWTPSSADRAAGRLPGYG 257          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.890e-30
Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 2
Query:   17 TGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            TG    + +E+ AFL     +T+ G+  A  GP +WG C+  E+  + SYC  S ++  PC P  +Y+GRG I + +NYNYG  GEA+  DLL++PE +  +  ++F+ A+W WMTP +  +PS HD   G W P+  D  + R P +G
Sbjct:  131 TGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEW--PCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTP-QSPKPSCHDVITGQWTPSSGDIAAGRVPGYG 276          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.890e-30
Identity = 60/151 (39.74%), Postives = 82/151 (54.30%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            G TG    + +E+ AF A    +TS    +    P  WG C  +E++P+  YCD   K +YPC   A+YYGRG + + WNYNYG  G  L  +LL  PE +  +  L+FEAA+W WM P     PS H+   G W P++ D  + R P FG
Sbjct:  106 GMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCV--ADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFG 254          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.635e-30
Identity = 61/151 (40.40%), Postives = 87/151 (57.62%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GT+G    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLL++P+ +  +  ++F+ A+W WMTP +  +PS HD  +G W P+  D  + R P FG
Sbjct:  122 GTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVIIGRWNPSSADRAANRLPGFG 269          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.635e-30
Identity = 60/151 (39.74%), Postives = 87/151 (57.62%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  DLL +P+ +  + T++F+ A+W WMT  +  +PS+H    G W P+  D  + R P FG
Sbjct:  123 GTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFG 270          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 1.478e-29
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG    + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  DLL +P+ +  + T++F+ A+W WMT  +  +PS+H    G W P+  D  + R P FG
Sbjct:  120 GTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFG 267          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.521e-29
Identity = 61/152 (40.13%), Postives = 90/152 (59.21%), Query Frame = 2
Query:   14 TTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            TTG    + +E+ AFLA    +T+ G+  A  GP +WG C+  E + +    YC  S ++  PC  G +YYGRG I I +NYNYG  G+A+ ++LLS+P+ +  +AT++F+ A W WMTP +  +PS H    G W P  ND  + R P +G
Sbjct:  123 TTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVMTGQWTPNGNDQAAGRVPGYG 271          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.293e-29
Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = 2
Query:    5 ASGTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            A   TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    SQPS H    G W PT  D+ + R P +G
Sbjct:  138 AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYG 281          
The following BLAST results are available for this feature:
BLAST of EY674872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHI3_TOBAC1.746e-3041.72Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHIB_VITVI2.280e-3041.72Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI2_PEA2.978e-3041.89Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI9_ORYSJ3.890e-3038.93Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI8_POPTR3.890e-3039.74Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
CHIT_SOLTU6.635e-3040.40Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHIA_SECCE6.635e-3039.74Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI1_HORVU1.478e-2939.7426 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHI1_ORYSJ2.521e-2940.13Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSJ3.293e-2940.52Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-E10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674872 ID=EY674872; Name=EY674872; organism=Citrus sinensis; type=EST; length=1024bp
CCTCGCGTCCGGTACCACCGGTACTCCCCCTTTTAAGATGAAGGAGATTT
GCGCTTTTCTTGCCCACGTCTGCTGCAAGACCTCTTGTGGATATGGGGTG
GCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAACCATGAAATGAG
CCCCAGTCAGTCATATTGTGATGATTCCTACAAATACACATATCCCTGCA
CCCCTGGAGCTGAGTACTACGGCCGAGGTGCTATACCTATATACTGGAAC
TATAACTATGGAGCTACTGGGGAAGCATTGAGGGCGGATCTGTTGAGTCA
TCCTGAATACATTGAGCAGAATGCTACCCTTGCCTTTGAGGCTGCAATTT
GGAAGTGGATGACCCCGGTCAAGAAATCCCAGCCTTCAGCCCATGATGCC
TTTGTTGGCAACTGGAAGCCCACCAAGAATGATACTTTGTCCAAACGGGG
ACCTAACTTTGGGTACCACCAATGAATATTCTCTATGGTGAGAACGTATG
CGGTCAGGGTGATATTTGATGCTATGAACAACATTGTCTCTCATTAATTG
TATTACCTTGATATGTTGGGGGGTGGGTCAATAACAGGCAGGAACCTTAA
TGGAAAAAACTCTTCTTTGTTGCTGAAAAAAAAAACCTTCAACCCCAAAC
ACCCCCGCCTTCTACCTTGCTTCCTTCTGGAGGACTTTTTTTTGTAACCA
AAACTTATTTTTGTGGGAATGGACCCCCCCCCCAAGGGGGGAACCATTTA
ACAAAAAAAAACCGGGGGTAAAAATAAAACATTTGTTTGAAAATTTTTTT
TTTTTTTTTTCTAACTTTATTAAATATTGACCCAAGGGAAACATTAATGT
GTGGGAAATTTGACATCCCCCCCTCTCTTTTTCTCCTTGTTAAAAAATTT
AAAAAATTTTATTTTGTTTATTTAGTAAAAAACATTCTTTTTTTTTTTGC
TGTGTGTGTTAATTTTAATTTTTAGTTGTTTATAGCGTTAGAAATATTCG
TCGTATATTTACAACCCACTTTCC
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