EY674872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.666e-14 Identity = 45/153 (29.41%), Postives = 70/153 (45.75%), Query Frame = 2 Query: 11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRA--DLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463 GTTG + KEI AF +T G + G G C+ ++ S YYGRG I + NY G+ + DL+++P+ + + ++F AIW WMT + ++PS H+ +G W P+ DT + R P +G Sbjct: 70 GTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-----------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMT-AQDNKPSCHNVIIGQWTPSPADTAANRVPGYG 200
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.321e-13 Identity = 43/153 (28.10%), Postives = 71/153 (46.41%), Query Frame = 2 Query: 11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRA--DLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463 GT G + KEI AF +T+ G + G G C+ ++ S YYGRG I + NY G+ + +L+++P+ + + ++F+ AIW WMT + ++PS H+ +G W P+ DT + R P +G Sbjct: 70 GTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTE-QDNKPSCHNVIIGQWTPSPKDTAANRVPGYG 200
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.321e-13 Identity = 40/122 (32.79%), Postives = 57/122 (46.72%), Query Frame = 2 Query: 11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVK 373 G G+ +EI A AH +T CY E+ S+ YCD+ YPC+ Y+GRG I + WN+NYG G A D L PE + + ++F+ A+W WM V+ Sbjct: 110 GRVGSEDDSKREIAAAFAHFTHETG-------------HFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVR 218
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 7.370e-13 Identity = 39/118 (33.05%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSP-SQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWM 361 GT T + +EI A+ AHV +T LCY E + +YC +S +Y PC P EY+GRG + + WNYNY G+ L D L+ P+ + ++ ++F+ ++W W+ Sbjct: 88 GTKCTDEDRKREIAAYFAHVTHETG-------------HLCYIEERDGHANNYCQESQQY--PCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190 The following BLAST results are available for this feature:
BLAST of EY674872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674872 ID=EY674872; Name=EY674872; organism=Citrus sinensis; type=EST; length=1024bpback to top |