EY674867

Overview
NameEY674867
Unique NameEY674867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: TMX3_HUMAN (Protein disulfide-isomerase TMX3 OS=Homo sapiens GN=TMX3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.325e-14
Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  104 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELTSQDVMEEKCGSAAICFVFI 472
            ++ D+W+V+F+APWCGHCKKL P W +    +K     VK+G +D  S  S+ S+F V+G+PTI +     D    Y G RT   I  FA       + P     L SQ + E       + FV++
Sbjct:   39 RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKG--DLAYNYRGPRTKDDIIEFAHRVSGALIRP-----LPSQQMFEHMQKRHRVFFVYV 157          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: PDI2_DICDI (Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.325e-14
Identity = 48/124 (38.71%), Postives = 68/124 (54.84%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELTSQDVMEE 436
            L+S NF   V    D+ +V F+APWCGHCK L P +++AA  L    K+ +  VDC   + L  +  VQG+PT++VF   K    PYEG RT  +I     E+L+     P +  L S + +EE
Sbjct:   46 LDSDNFHNSV-SEHDVTLVMFYAPWCGHCKTLKPLYEEAAKQLSANKKIAIAKVDCTQHEQLCKQNKVQGYPTLVVFKNGKAE--PYEGDRTTKSIVQTLEEELK-----PTISTLESNEDIEE 161          

HSP 2 Score: 76.6406 bits (187), Expect = 2.499e-13
Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 2
Query:   80 SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA-DKDSPIPYEGAR 337
            + F +LVL S    +VEF+APWCGHCK LAP + K    LK    V +  +D DS   + S   ++G+PTI++F A DK++PI YEG R
Sbjct:  384 TTFKKLVLDSPKDVLVEFYAPWCGHCKNLAPIYDKLGEYLKDVESVSIVKIDADS-NDVPSDIEIRGYPTIMLFKADDKENPISYEGQR 471          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.731e-14
Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 2
Query:   65 IELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKS--LMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 376
            + L+  +FDE V K   + +VEF+APWCGHCKKLAPE++ AA  L      + L  VD + EK+  L +K+ +QGFPTI +F     +   Y+G R A  I  +  +Q+
Sbjct:   37 LTLDVDSFDEAVAKHPFM-VVEFYAPWCGHCKKLAPEYENAAKALSKHDPPIVLAKVDANEEKNRPLATKYEIQGFPTIKIFRDRGKNIQEYKGPREADGIVDYLKKQV 144          

HSP 2 Score: 68.5514 bits (166), Expect = 6.805e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 2
Query:   77 SSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLET 382
            + N  + V KS    ++EF+APWCGHCKKLAP   +AA  L+   +V +  +D  +   + S+F+VQG+PT L F         Y+  RTA  I  F  +  ET
Sbjct:  385 ADNVHDFVFKSGKNVLIEFYAPWCGHCKKLAPILDEAATTLQSDEEVVIAKMDA-TANDVPSEFDVQGYPT-LYFVTPSGKVTSYDSGRTADDIVDFIKKSKET 486          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: PDIA1_PONAB (Protein disulfide-isomerase OS=Pongo abelii GN=P4HB PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.731e-14
Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPTILVF-GADKDSPIPYEGARTAGAI 352
            L  SNF E +   K L +VEF+APWCGHCK LAPE+ KAA  LK    +++L  VD   E  L  ++ V+G+PTI  F   D  SP  Y   R A  I
Sbjct:   29 LRKSNFAEALAAHKYL-LVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDI 125          

HSP 2 Score: 69.707 bits (169), Expect = 3.055e-11
Identity = 36/98 (36.73%), Postives = 47/98 (47.96%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD-SPIPYEGARTAGAIESF 361
            L   NF+++    K    VEF+APWCGHCK+LAP W K     K    +     DS  + +    V  FPT+  F A  D + I Y G RT    + F
Sbjct:  372 LVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKF 469          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.731e-14
Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPTILVF-GADKDSPIPYEGARTAGAI 352
            L  SNF E +   K L +VEF+APWCGHCK LAPE+ KAA  LK    +++L  VD   E  L  ++ V+G+PTI  F   D  SP  Y   R A  I
Sbjct:   31 LRKSNFAEALAAHKYL-LVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDI 127          

HSP 2 Score: 68.9366 bits (167), Expect = 5.211e-11
Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD-SPIPYEGARTAGAIESF 361
            L   NF+E+         VEF+APWCGHCK+LAP W K     K    +     DS  + +    V  FPT+  F A  D + I Y G RT    + F
Sbjct:  374 LVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAIKVHSFPTLKFFPASVDRTVIDYNGERTLDGFKKF 471          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.731e-14
Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPTILVF-GADKDSPIPYEGARTAGAI 352
            L  SNF E +   K L +VEF+APWCGHCK LAPE+ KAA  LK    +++L  VD   E  L  ++ V+G+PTI  F   D  SP  Y   R A  I
Sbjct:   29 LRKSNFAEALAAHKYL-LVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDI 125          

HSP 2 Score: 69.707 bits (169), Expect = 3.055e-11
Identity = 36/98 (36.73%), Postives = 47/98 (47.96%), Query Frame = 2
Query:   71 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD-SPIPYEGARTAGAIESF 361
            L   NF+++    K    VEF+APWCGHCK+LAP W K     K    +     DS  + +    V  FPT+  F A  D + I Y G RT    + F
Sbjct:  372 LVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKF 469          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: DJC10_RAT (DnaJ homolog subfamily C member 10 OS=Rattus norvegicus GN=Dnajc10 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.731e-14
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 2
Query:   62 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYE---GARTAGAIESFALEQLET 382
            SI+L    F+E VL+ K  W+++F+APWCG C+  APE++  A  +KGKVK G VDC +      K  ++ +P++ ++  ++     +E    +R A  I +    +LET
Sbjct:  672 SIDLTPQTFNEKVLQGKTHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQAYPQTCQKAGIRAYPSVKLYLYERAKKSIWEEQINSRDAKTIAALIYGKLET 781          

HSP 2 Score: 78.5666 bits (192), Expect = 6.576e-14
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  110 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELT 415
            K+ W+V+FFAPWC  C+ L PE +KA+  L G++K+G +DC   + L + +N+Q +PT +VF  ++ S   YEG  +A  I  F +E L      P V+ LT
Sbjct:  468 KEPWLVDFFAPWCPPCRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVF--NQSSVHEYEGHHSAEQILEF-IEDLRN----PSVVSLT 562          

HSP 3 Score: 75.8702 bits (185), Expect = 4.263e-13
Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 2
Query:   59 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNV 388
            E I L    FD  V  S +LW V F++P C HC  LAP W++ A  + G +++G V+C  ++ L     V  +P++ +F +   + + Y G R+  ++ SFA++ + T V
Sbjct:  130 EIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGM-AAVKYNGDRSKESLVSFAMQHVRTTV 237          

HSP 4 Score: 74.7146 bits (182), Expect = 9.496e-13
Identity = 39/126 (30.95%), Postives = 64/126 (50.79%), Query Frame = 2
Query:   65 IELNSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELTSQDVMEE 436
            + L  + F+ELV + K  ++W+V+F++PWC  C+ L PEWK+ A  L G + +G VDC    S  ++ NVQ +P I  +         Y  +      ++++L        P   I+LT Q   E+
Sbjct:  559 VSLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSVDCQQYHSFCTQENVQRYPEIRFYPQKSSRAYQYH-SYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEK 683          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: TMX3_MOUSE (Protein disulfide-isomerase TMX3 OS=Mus musculus GN=Tmx3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.260e-14
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 2
Query:   68 ELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELTSQDVMEEKCGSAAICFVFI 472
            +LN S  D    +  D+W+V+F+APWCGHCKKL P W +    +K     VK+G +D  S  S+ S+F V+G+PTI +     D    Y G RT   I  FA       + P     L SQ + +       + FV+I
Sbjct:   33 DLNESFKDN---RKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKG--DLAYNYRGPRTKDDIIEFAHRVSGALIRP-----LPSQQMFDHVRKRHRVFFVYI 160          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: TMX3_PONAB (Protein disulfide-isomerase TMX3 OS=Pongo abelii GN=TMX3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.855e-14
Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  104 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELTSQDVMEEKCGSAAICFVFI 472
            ++ D+W+V+F+APWCGHCKKL P W +    +K     VK+G +D  S  S+ S+F V+G+PTI +     D    + G RT   I  FA       + P     L SQ + E       + FV+I
Sbjct:   39 RNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKG--DLAYNHRGPRTKDDIIEFAHRVSGALIRP-----LPSQQMFEHMQKRHRVFFVYI 157          
BLAST of EY674867 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.855e-14
Identity = 52/140 (37.14%), Postives = 74/140 (52.86%), Query Frame = 2
Query:   65 IELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKS--LMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVIELTSQDVMEEKCGSAAICFVF 469
            + L++ NFD+ + +   + +VEF+APWCGHCK LAPE++KAA  L      + L  VD + EK+  L  K+ VQGFPT+ +F     S   Y+G R A  I    +E L+  V P        +D    + G   I  VF
Sbjct:   41 LTLHADNFDDAIGQHPFI-LVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRNGGKSIQEYKGPREAEGI----VEYLKKQVGPASKEIKAPEDATYLEDGKIHIVGVF 175          

HSP 2 Score: 73.559 bits (179), Expect = 2.116e-12
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 2
Query:   77 SSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK--VKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLET 382
            + N  ++V KS    ++EF+APWCGHCKKLAP   +AA  L+ +  V +  +D  +E  +  +F+VQG+PT L F       + YEG RTA  I  +  +  ET
Sbjct:  388 ADNVHDVVFKSGKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKMDA-TENDVPGEFDVQGYPT-LYFVTPSGKKVSYEGGRTADEIVDYIRKNKET 489          
The following BLAST results are available for this feature:
BLAST of EY674867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
TMX3_HUMAN1.325e-1435.71Protein disulfide-isomerase TMX3 OS=Homo sapiens G... [more]
PDI2_DICDI1.325e-1438.71Protein disulfide-isomerase 2 OS=Dictyostelium dis... [more]
PDI_MAIZE1.731e-1441.28Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]
PDIA1_PONAB1.731e-1445.92Protein disulfide-isomerase OS=Pongo abelii GN=P4H... [more]
PDIA1_MACFU1.731e-1445.92Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_HUMAN1.731e-1445.92Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
DJC10_RAT1.731e-1434.55DnaJ homolog subfamily C member 10 OS=Rattus norve... [more]
TMX3_MOUSE2.260e-1435.51Protein disulfide-isomerase TMX3 OS=Mus musculus G... [more]
TMX3_PONAB3.855e-1435.71Protein disulfide-isomerase TMX3 OS=Pongo abelii G... [more]
PDI_HORVU3.855e-1437.14Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-E04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674867 ID=EY674867; Name=EY674867; organism=Citrus sinensis; type=EST; length=1017bp
ACGTCTAAGTGGGAACGCAACTGGAGGATCAAGTGATAAATCTAAATCTG
ATTCTAATGAGTCTATAGAATTGAATTCTAGCAATTTCGATGAGTTGGTG
CTCAAAAGCAAAGATCTTTGGATTGTGGAGTTTTTTGCACCTTGGTGTGG
ACACTGTAAAAAGCTGGCTCCTGAGTGGAAGAAGGCTGCTAATAACTTGA
AGGGCAAAGTGAAACTGGGTCATGTTGATTGCGACTCTGAGAAGTCTTTG
ATGAGCAAATTCAATGTTCAAGGGTTCCCCACCATCTTAGTATTTGGTGC
TGACAAAGATAGCCCAATTCCTTATGAGGGTGCTAGAACTGCGGGAGCTA
TTGAATCATTTGCTCTGGAACAGCTGGAAACAAATGTTGCACCACCTGAA
GTGATTGAACTTACCAGCCAAGATGTCATGGAAGAGAAGTGTGGCTCAGC
AGCCATCTGCTTTGTTTTCATTTCCTGCCTGAACATTTTGGAACTCCCAG
GCGGAAGGAAGGAACAAGTACCCTTGAGAAGTTGTTAATATTTGGCAGAA
AAATTTCAAAAGGGGTCTTTACAGCCTTTGTTTGGGCAGCTGCGGGTAAC
CAGCCAAATTTTGGAAACCGCCTTTGAATTGGGTGGCTAATGGGTAACCC
ACCCCTGGTAGCCCTTTAATGGGGAAGAAAAGGATTTTAAACACCCCCCT
AAAAAAAGTTGCATTTTGGGCCCCCACGCATTTTGAAAAAATTTGTCAGG
GGAAACCGGGCGGGGGGAGGAAAAAGGGGAAATTTTTGCCCCAAAGATGG
GGACCCCCCTCTTATCGTGGGAAAAAAGGAGAAACCAGGGGGACAGGGAA
AAAAAAAGGGAACAAAAACTTTTTGAAAAAAAGGGAATAAAATTTTCTTC
TTCTTTGTTGTGAAAACCCCCCCACTGGAGCGAAAAATAAATGGCGCCCA
GAGGGCGCAAAGATGGGGGGATGAATTATGGAATAGCTACCCCCTTCTTT
TGTTCTATATACCAGCT
back to top