EY674862

Overview
NameEY674862
Unique NameEY674862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM5_HUMAN (Acyl-coenzyme A synthetase ACSM5, mitochondrial OS=Homo sapiens GN=ACSM5 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.459e-12
Identity = 60/166 (36.14%), Postives = 80/166 (48.19%), Query Frame = 1
Query:   43 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSA--TFPFFGVQPVIVDEKGVEIEGECSGYLC--IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVV 528
            GE +NP     + +  G     + + + Q+ET   +I   P     K GS     P + VQ  IVD++G  +     G +   I+ + P  F   Y D+   E T       +Y TGD    DKDGY W  GR DDVIN S +RIG  EVESAL  HP   ++AVV
Sbjct:  347 GEALNPDVREKWKHQTG---VELYEGYGQSET--VVICANPKGMKIKSGSMGKASPPYDVQ--IVDDEGNVLPPGEEGNVAVRIRPTRPFCFFNCYLDNP--EKTAASEQGDFYITGDRARMDKDGYFWFMGRNDDVINSSSYRIGPVEVESALAEHPAVLESAVV 503          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM3_HUMAN (Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Homo sapiens GN=ACSM3 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.459e-12
Identity = 60/166 (36.14%), Postives = 76/166 (45.78%), Query Frame = 1
Query:   37 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK--SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVV 528
            S GEPI P     + N  G     I + + QTET   +I         KPGS   P       IVD  G  +     G + I+   + P    T Y D+     +  +    +Y TGD    DKDGY W   R DDVI  SG+RIG  EVE+AL  HP  A++AVV
Sbjct:  351 SAGEPITPDVTEKWRNKTG---LDIYEGYGQTET--VLICGNFKGMKIKPGSMGKPSPAFDVKIVDVNGNVLPPGQEGDIGIQVLPNRPFGLFTHYVDNPSKTASTLRG--NFYITGDRGYMDKDGYFWFVARADDVILSSGYRIGPFEVENALNEHPSVAESAVV 509          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM5_MOUSE (Acyl-coenzyme A synthetase ACSM5, mitochondrial OS=Mus musculus GN=Acsm5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12
Identity = 48/111 (43.24%), Postives = 59/111 (53.15%), Query Frame = 1
Query:  202 PFFGVQPVIVDEKGVEIEGECSGYLC--IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVV 528
            P + VQ  IVDE+G  +     G +   IK + P  F   Y D+   E T       +Y TGD    D+DGY W  GR DDVIN S +RIG  EVESAL  HP   ++AVV
Sbjct:  396 PPYDVQ--IVDEEGNVLPPGKEGNIAVRIKPTRPFCFFNCYLDNP--EKTAASEQGDFYITGDRAHMDEDGYFWFLGRNDDVINSSSYRIGPVEVESALAEHPAVLESAVV 502          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM1_BOVIN (Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Bos taurus GN=ACSM1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12
Identity = 50/122 (40.98%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  181 KPGSA--TFPFFGVQPVIVDEKG----VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVV 528
            KPGS     P F +Q  I+D+KG       EG     + IK + P      Y ++   E T       +Y TGD  + D++GY W  GR DDVIN SG+R+G AEVE+AL  HP  A++AVV
Sbjct:  385 KPGSMGKAIPPFDIQ--IIDDKGNIQPPNTEGNIG--IRIKPTRPIGLFMYYENNP--EKTAEVECGDFYNTGDRATIDEEGYFWFLGRSDDVINASGYRVGPAEVENALAEHPAVAESAVV 500          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM3_PONAB (Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Pongo abelii GN=ACSM3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.006e-11
Identity = 59/166 (35.54%), Postives = 76/166 (45.78%), Query Frame = 1
Query:   37 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK--SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVV 528
            S GEPI P     + N  G     I + + QTET   +I         KPGS   P       IVD  G  +     G + I+   + P    T Y D+     +  +    +Y TGD    D+DGY W   R DDVI  SG+RIG  EVE+AL  HP  A++AVV
Sbjct:  351 SAGEPITPDVTEKWRNKTG---LDIYEGYGQTET--VLICGNFKGMKIKPGSMGKPSPAFDVKIVDVNGNVLPPGQEGDIGIQVLPNRPFGLFTHYVDNPSKTASTLRG--NFYITGDRGYMDEDGYFWFVARADDVILSSGYRIGPFEVENALNEHPSVAESAVV 509          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM5_RAT (Acyl-coenzyme A synthetase ACSM5, mitochondrial OS=Rattus norvegicus GN=Acsm5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.242e-11
Identity = 47/111 (42.34%), Postives = 58/111 (52.25%), Query Frame = 1
Query:  202 PFFGVQPVIVDEKGVEIEGECSGYLCI--KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVV 528
            P + VQ  IVDE+G  +     G + I  K + P      Y D+   E T       +Y TGD    D+DGY W  GR DDVIN S +RIG  EVESAL  HP   ++AVV
Sbjct:  396 PPYDVQ--IVDEEGNVLPPGKEGNIAIRIKPTRPFCLFNCYLDNP--EKTAASEQGDFYITGDRAHMDEDGYFWFVGRNDDVINSSSYRIGPVEVESALAEHPAVLESAVV 502          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM2_MOUSE (Acyl-coenzyme A synthetase ACSM2, mitochondrial OS=Mus musculus GN=Acsm2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.928e-11
Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 1
Query:  109 ISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCI--KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVVGVEHEGKG 552
            I + + QTETG  +I  +      KPG     F      ++DE+G  +     G + I  K  WP    + Y D+ +      +    ++  GD   +D +GY    GR DD+IN SG+RIG +EVE+AL  HP  ++ AV+      +G
Sbjct:  358 IREIYGQTETG--LICRVSRTMKVKPGYLGTAFAHYDVQVIDEQGNVLPPGKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRG--DFWLMGDRGIKDPEGYFHFIGRSDDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRG 503          
BLAST of EY674862 vs. ExPASy Swiss-Prot
Match: ACSM1_HUMAN (Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Homo sapiens GN=ACSM1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.825e-11
Identity = 55/144 (38.19%), Postives = 73/144 (50.69%), Query Frame = 1
Query:  115 DTWWQTETGGFMITPLPGAWPQKPG--SATFPFFGVQPVIVDEKGVEIEGECSGYLCI--KSSWPGAFRTLY-GDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALFSHPQCAKAAVVG 531
            + + Q+ETG  +I         KPG      P + VQ  ++D+KG  +     G + I  K   P +    Y GD E+        F   Y TGD    D++GY    GR DD+IN SG+RIG AEVESAL  HP  A++AVVG
Sbjct:  365 ENYGQSETG--LICATYWGMKIKPGFMGKATPPYDVQ--VIDDKGSILPPNTEGNIGIRIKPVRPVSLFMCYEGDPEKTAKVECGDF---YNTGDRGKMDEEGYICFLGRSDDIINASGYRIGPAEVESALVEHPAVAESAVVG 501          
The following BLAST results are available for this feature:
BLAST of EY674862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSM5_HUMAN3.459e-1236.14Acyl-coenzyme A synthetase ACSM5, mitochondrial OS... [more]
ACSM3_HUMAN3.459e-1236.14Acyl-coenzyme A synthetase ACSM3, mitochondrial OS... [more]
ACSM5_MOUSE5.901e-1243.24Acyl-coenzyme A synthetase ACSM5, mitochondrial OS... [more]
ACSM1_BOVIN5.901e-1240.98Acyl-coenzyme A synthetase ACSM1, mitochondrial OS... [more]
ACSM3_PONAB1.006e-1135.54Acyl-coenzyme A synthetase ACSM3, mitochondrial OS... [more]
ACSM5_RAT2.242e-1142.34Acyl-coenzyme A synthetase ACSM5, mitochondrial OS... [more]
ACSM2_MOUSE2.928e-1131.33Acyl-coenzyme A synthetase ACSM2, mitochondrial OS... [more]
ACSM1_HUMAN3.825e-1138.19Acyl-coenzyme A synthetase ACSM1, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-D11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674862 ID=EY674862; Name=EY674862; organism=Citrus sinensis; type=EST; length=983bp
CCCGCTACTCCCGCACCCCTTTTACGGGTCTTGGGAAGTGTAGGCGAGCC
TATAAATCCAAGTGCATGGAGGTGGTTTTTCAATGTAGTTGGAGATTCAA
GGTGTCCTATCTCCGACACTTGGTGGCAAACTGAAACTGGTGGCTTCATG
ATTACTCCGTTACCAGGTGCCTGGCCGCAGAAGCCTGGTTCTGCTACGTT
TCCTTTCTTTGGGGTTCAGCCTGTCATAGTAGATGAGAAGGGTGTTGAAA
TTGAAGGCGAGTGCAGTGGGTATCTTTGCATAAAAAGCTCATGGCCTGGT
GCATTTCGGACTCTTTATGGTGATCATGAAAGATACGAAACCACTTACTT
TAAGCCATTCCCAGGATATTATTTCACTGGTGATGGCTGCAGCAGGGACA
AGGATGGATACCACTGGCTCACCGGACGAGTTGATGATGTCATCAACGTT
AGTGGACATCGCATTGGCACAGCAGAAGTGGAATCTGCTTTATTTTCTCA
TCCCCAATGTGCAAAAGCGGCTGTGGTTGGTGTTGAACATGAAGGTAAAG
GGACAGGGTATATATGCATTTGTTTCTCTCGTGGAGGGGGGTCCTTACAG
TGAAAAACTCCGGAAAAACCCTTGTTCTTGGCGTGAAAAAACCAAATTGG
GAACATTTTGCGGTCCCCGAAAAAATTCCACTTGGGCCCCCTGGCCCTTC
CCAAAAACCTAGGAAGGGAAAAAAAAAAGGAGGAAAAATTCTTAGAAAAA
AATTTGCTTCCCCGGGCGTTTTTAAAAAAAACGGGGGAAAAAAACAAACC
CACACTTTGCCAAATTCCCGGGGTGGGGGGCCAAAAAAAACTGGAATTGC
CCCCTCTGGCGAGATATGTCCCAAAAAAAAACCCAATATTTTTTCCCTTT
TTTTTTTTTTTACCCCCCCCCCCCCCCCCATCCAAAAACCCCCGGGTGGT
TTTTTATTTTAAAAAATATATTATATTGTTACC
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